Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0419 ATGCACCTATTTCCCTTTCCTATCGTGTCTTCTCCTCCTTTATCCATCTCCTCATTGTTCCCTTCATCCTTTATAACACTCACAAATCACACTCTCTCTCACGCACTCTCCACTTCTCACTTTCCTCTTCTCAACACCATGAGGAATAATAACCTAGTGGTGGAGAACTTTTCTGAGTTCTATGACAACTGGGTTTTGAAGCTTGAGCAAATCCTACACCAGCTTCTACAAGTTTCCAAGAAGAAAACCAATGGCAACACTGAACAAGAGGTGCAAGAACTTGTGTCAAAAGTCACTTCTCATATCAAACAATACTACACTGTGAAATGGGGTGCTGCTCATGAACACGTTCTTGTTTTCTTCTCACCACCTTGGCTTACTCCATTGGAGAATGCATACCTTTGGATCACTGGTTGGAAGCCCTCAACTGTTTTCAAACTCGTGGAGTCTCTGAACAAGACGACAACGTTTAACATGACACAGGAGCAGGAGAATAAGGTTGAGGAGCTGAGAATGAGGATCAAGATGGAGGAGGAGAAGGTGGAGAGTGAGATGGAGAGGCAGCAGGTGGCACTGGCTGATAGGAAGACGGTGGAGCTGGCAAAGATGTGTAGCAGAGCGAGGAATGATGATGGTGGTGGTGGTGGTGGTGGTGATGTGGTTATGGTGGCAGAGAAGGTTGGTGTGACTATGAAGGGAGTGTTGACTGGGTTGGAGAAAATCATGAAGAGTTCTGATTGTGTTAGACTTAAAACACTTAAAGGGGTGTTGGATTTGCTTACACCAATGCAATGTGTGTATTTCTTGGCTGCTAATATTGCTATGCAGCTTCGTCTTAGACAATGGGGGAAGAAGAGAGATATAGCTGGATCCATAATGAATGATAAGTGA 891 0.4444 MHLFPFPIVSSPPLSISSLFPSSFITLTNHTLSHALSTSHFPLLNTMRNNNLVVENFSEFYDNWVLKLEQILHQLLQVSKKKTNGNTEQEVQELVSKVTSHIKQYYTVKWGAAHEHVLVFFSPPWLTPLENAYLWITGWKPSTVFKLVESLNKTTTFNMTQEQENKVEELRMRIKMEEEKVESEMERQQVALADRKTVELAKMCSRARNDDGGGGGGGDVVMVAEKVGVTMKGVLTGLEKIMKSSDCVRLKTLKGVLDLLTPMQCVYFLAANIAMQLRLRQWGKKRDIAGSIMNDK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0419 296 Coils Coil 160 187 - -
Lal3g0419 296 PANTHER PROTEIN DOG1-LIKE 4 51 287 - -
Lal3g0419 296 ProSiteProfiles DOG1 domain profile. 54 289 IPR025422 GO:0006351|GO:0043565
Lal3g0419 296 PANTHER - 51 287 - -
Lal3g0419 296 Pfam Seed dormancy control 73 149 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0419 Lal-Chr3 2901776 2902666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0419 73 280 bZIP Transcription Factor Family AT5G06960 25.962 8.63e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0419 - - gmx:100808459 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0419 3 2901776 2902666 Lal3g0419 3 2901776 2902666 ECH
Lal5g1299 5 15694952 15695713 Lal3g0419 3 2901776 2902666 ECH