Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0418 ATGGGAATGACATGCAACACATTTGGATATTTGCTCAGAATATATGTTTGTTTGATTTCTGTGTGGGGAATTCATGAGTGTTTGTCACTTAATGATGAAGGATTAGCTTTGTTGGAGTTCCGAGCAAGAATAACTTGTGATCCTTATGTTGCTTTGGCAAATTGGAATTCAAGTGATTGTGACCCTTGCAAGTGGTTCGGTGTTCATTGTATCGATGGTAAAGTGCAAATGCTGGACCTAAATGAGCTATCTTTGGAAGGGACATTGACTCCGGAACTAGGGAAACTCAGTCACTTAAAATATCTTGTGTTACGCAAGAATAGCTTTACCGGCACCATTCCCAAAGAACTTGGCAATCTAGTTATGCTAGAGTTATTGGACTTAAGGGAGAATAACTTAACTGGAAGTATCCCAACAGAAATTGGCAGGATGTCATTGTTGAAGCACTCTGTGTGGCACAGAAAATTCAAGCAATGGAATACAACATATTCATTGGTTTTTACAATGAAATTAGCACTTATGAAATACCTCAAGGCCTTTGCACTGCCAATGTTCAAGCTAGGAAAGGCTACCCGTCATGGCCCTGGGGAGAATTACCGTGACCTTATTCGTAGCTCTAATGAGTCTGAGATTGCTCAGAATGGAGAAAATCTTGTCAATTCTGCACGTCGTAGATTATTTGATCAGCCCAGTAATCTCGCAGCTGCACCTTATATTGGTGGACTTATTATAGAGTTAAGTTCTGTTCCAACTACCCTGAGTAGTGGAGCTTTCCCAGCTCTGTTAGATGCGAAAAATGAACAGAATCAGTCACCACCATCTTTTGCTTCTCACCATAATTCTCATAGAAATCAACAACATTCAGCTAATGATGCTTTTGGAAACTTGTGGAAGTATATAGTTATTATTGTAGTTGTTGCTCTGTTGGTCATTGTTATAATAGTCATTCTTTGCGTTTGGCAAAAAAAAGCAGCAAAAGTGATAAGCCCCTGGAAATCAGGAATAAGTGGACAACTGCAGAAAGCATTTGTAACAGGGGTCCCCAAGCTGAATCGAGCAGAACTAGAGACAGCGTGTGAGGATTTCAGCAATATCATTAACAGTTATGACGAGTGCACCATATATAAAGGAACACTTTCCAGTGGCGTCGAGATTGCTGTTGTTTCTACTCTGATTTCATCTCCCCAAGAATGGTCAAAGAGAATGGAGATGAATTACCGGAAAAAGATTGATACTTTGTCCAGGGTAAACCATAAGAACTTTGTTAATCTTATTGGTTATTGTGAGGAAGAAGAACCATTTACAAGGATGATGGTGTTTGAGTATGCTCCAAATGGAAGCCTATTTGAGCATCTGCATGTTAAGGAAGTTGAACGCCTTGATTGGAGTGAAAGGACAAGGATCATTTTGGGCACTGCTTATTGTCTTCAGTATATGCACCATGATCTGAATCCACCAGTACCTCATAGGAACCTCAATTCATGTGCCATCTCATTAACAGATGATTTCGCTGCTAAGATTGGAGATATCACTTATGGAGATATTGTATCACCAATTACTAAGACAACTGGAGATGATTCAAAGAAATTTGAGTTGCCACCGCACGCTGATCCTGAAACAAATGTTTATAACTTCGGAATATTGTTGCTTGAAATCATTTCTGGGAAATTGCCTTACTCTGAAGAACAAGGCAACCTTGTAAACTGGGCTTCGGAGTACTTAAACGATAAGCGAAGCATAAGCTATATGATTGATCCAACCCTGGAATCTTTCAAAGACAATGAAGTTGATGTTATATGTGAGGTGATTCAAGATTGTATTCAACCTGACCCAAGGCTAAGACCAACAATGAAGGAAATAACTACCAAATTGAGGGAAGTACTTGGTATATCACCTGAACAAACTGTTCCAAGACACTCTCCACTGTGGTGGGCTGAACTTGAGATCTTATCAATGGAAACAACTTAA 1968 0.3958 MGMTCNTFGYLLRIYVCLISVWGIHECLSLNDEGLALLEFRARITCDPYVALANWNSSDCDPCKWFGVHCIDGKVQMLDLNELSLEGTLTPELGKLSHLKYLVLRKNSFTGTIPKELGNLVMLELLDLRENNLTGSIPTEIGRMSLLKHSVWHRKFKQWNTTYSLVFTMKLALMKYLKAFALPMFKLGKATRHGPGENYRDLIRSSNESEIAQNGENLVNSARRRLFDQPSNLAAAPYIGGLIIELSSVPTTLSSGAFPALLDAKNEQNQSPPSFASHHNSHRNQQHSANDAFGNLWKYIVIIVVVALLVIVIIVILCVWQKKAAKVISPWKSGISGQLQKAFVTGVPKLNRAELETACEDFSNIINSYDECTIYKGTLSSGVEIAVVSTLISSPQEWSKRMEMNYRKKIDTLSRVNHKNFVNLIGYCEEEEPFTRMMVFEYAPNGSLFEHLHVKEVERLDWSERTRIILGTAYCLQYMHHDLNPPVPHRNLNSCAISLTDDFAAKIGDITYGDIVSPITKTTGDDSKKFELPPHADPETNVYNFGILLLEIISGKLPYSEEQGNLVNWASEYLNDKRSISYMIDPTLESFKDNEVDVICEVIQDCIQPDPRLRPTMKEITTKLREVLGISPEQTVPRHSPLWWAELEILSMETT 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0418 655 ProSiteProfiles Protein kinase domain profile. 325 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0418 655 Gene3D Ribonuclease Inhibitor 33 151 IPR032675 -
Lal3g0418 655 PANTHER LRR RECEPTOR-LIKE KINASE 1 655 - -
Lal3g0418 655 Pfam Protein tyrosine and serine/threonine kinase 374 624 IPR001245 GO:0004672|GO:0006468
Lal3g0418 655 SUPERFAMILY L domain-like 30 149 - -
Lal3g0418 655 PANTHER PROTEIN MALE DISCOVERER 2 1 655 - -
Lal3g0418 655 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lal3g0418 655 Gene3D Phosphorylase Kinase; domain 1 331 442 - -
Lal3g0418 655 Gene3D Transferase(Phosphotransferase) domain 1 443 635 - -
Lal3g0418 655 SUPERFAMILY Protein kinase-like (PK-like) 343 623 IPR011009 -
Lal3g0418 655 MobiDBLite consensus disorder prediction 267 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0418 Lal-Chr3 2895326 2900663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0418 27 629 Receptor kinase-like Gene Family AT2G42290 25.416 5.48e-45 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lal3g0418 PK_Tyr_Ser-Thr 1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0418 - - lang:109337921 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0984 5 12086003 12091703 Lal3g0418 3 2895326 2900663 LSH