Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0407 ATGAAGACTACTTGTGATGAATGGAAGCCTTTTATAGTAATGATAGCAGTTGATTTTTCTTTTGCTGCTGTGAATATTCTTCTCAAGAAAGTCCTAGAAGAAGGAATGAACCATTTGGTTTTTATCACTTACAGGCTATCAATTGCTACCATTTTCTTAGCCCCAATCGGTTACTTTTGGGAAAGAAATGACAGACCACGACTCACATTTCGAATTTTATGTTACCTCTTCTTCAGTGCCATAGTTGGGGCATCAGTTACACAATACTTCTTCCTTCTTGGGATCCAGAACACTTCTGCTACCTTTGCTTGTGCCTTTGTCAATATAGTTCCCGTGGTTACTTTCGTAATGGCATTACCATTTGGGTTAGAGACTGTGAACATCAAATGCAATGGTGGGAGAGCAAAGATTGTTGGCACATTGGTGTGTATAGGAGGTGTATTGTTGTTAACACTTTACAAAGGAAAGCCATTGGTTAATTATTCTCAGTATCAGCCTTCAACTTCAGTAACCAAGGTAGCTTCTACAAGAAAATGGACCATTGGTGTGGTAGCATTGATTTTGGGGACACTTTTTTTGTCTTCATGGTTTATATTACAATCAAACATAAGTAAGAGATACCCATGTCAGTATTCAAGCACAGCCATAATGACATTCTTTGGAGCCATTCAATCTGCTGTTATTAGCTTGGCCATTGACCACCATAACTTGTCTATATGGATTATCAATGGAAAGATACAAATTATTGCTGTTCTCTATTCTGGGATAGTTGGGTCAGGGTTGTGCCTTGTGGGCATGTCATGGTGTGTGAAGAAAAGGGGTCCTGTTTTTACTGCAGCATTTAGCCCCCTTGTTCAGATAATTGCAGCCATGATTGATATCCCAATCTTGCATGAGCAACTTCATCTTGGAAGTGTTGTGGGGTCCATCACGGTGATGGTGGGATTATACATTCTTCTATGGGGTAAAAACAAGGAATTGCAAGATCGTGTGAAAAAGTTGGTCCAGAGAGTTGAAGAAGTCAAGGGACAAGAATCTCAAACACAACACATAGTATAA 1059 0.3947 MKTTCDEWKPFIVMIAVDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFLAPIGYFWERNDRPRLTFRILCYLFFSAIVGASVTQYFFLLGIQNTSATFACAFVNIVPVVTFVMALPFGLETVNIKCNGGRAKIVGTLVCIGGVLLLTLYKGKPLVNYSQYQPSTSVTKVASTRKWTIGVVALILGTLFLSSWFILQSNISKRYPCQYSSTAIMTFFGAIQSAVISLAIDHHNLSIWIINGKIQIIAVLYSGIVGSGLCLVGMSWCVKKRGPVFTAAFSPLVQIIAAMIDIPILHEQLHLGSVVGSITVMVGLYILLWGKNKELQDRVKKLVQRVEEVKGQESQTQHIV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0407 352 PANTHER WAT1-RELATED PROTEIN 10 341 - -
Lal3g0407 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Lal3g0407 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 324 - -
Lal3g0407 352 Pfam EamA-like transporter family 181 320 IPR000620 GO:0016020|GO:0016021
Lal3g0407 352 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020|GO:0016021
Lal3g0407 352 PANTHER WAT1-RELATED PROTEIN 10 341 IPR030184 GO:0016021|GO:0022857
Lal3g0407 352 Coils Coil 324 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0407 Lal-Chr3 2820666 2823698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0407 6 328 Nodulin-like Gene Family AT1G11460 39.264 9.67e-88 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0407 - - gmx:100803670 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0692 7 13903344 13906421 Lal3g0407 3 2820666 2823698 PCT
Lal19g0769 19 11754233 11756851 Lal3g0407 3 2820666 2823698 PCT
Lal3g0407 3 2820666 2823698 Lal7g0692 7 13903344 13906421 PCT
Lal3g0407 3 2820666 2823698 Lal19g0769 19 11754233 11756851 PCT