Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0383 ATGGTTTTTGAAGATACCCAAAAATCAACCATCACCGATGACAAAATCACCACAAACCCTAACATTACCAATGATGACGCTGATCTTGAGGAAGGAGAGATTCTCGACGACGCCGGCGATTCCTCCGCCGCCGTGGCCCGTAACCCGCTGGAGAATTCTTGGACCTTCTGGTTCGATAGCCCTTCCGCAAAGTCCAGACAAACCGCTTGGGGAAGCTCCATTCGAAACATCTATACCTTCTCCACTGTTGAGGACTTTTGGGGCGTATATAATAACATAATTCATCCAAGCAAGTTGGCTATGGGAGCAGACTTATATTGTTTCAAGCATAAGATTGAGCCTAAATGGGAGGACCCGATTTGTGCCAATGGGGGCAAATGGACTGTGAGCCCTTCTCGGGGGAAAGCTGATACTAGTTGGCTATATACGTTGTTGGCAATGATTGGAGAGCAATTTGATCATGGAGATGAAATTTGTGGAGCGGTAGTCAATGTGCGAAGTAAGCAGGATAAAATTTCTATTTGGACTAAGAACGCTTCCAATGAAGCTGCTCAGATGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTATAATGATACTGTGGGCTTTATTTTTCATGAGGATGCAAAGAAGCTTGACAGAGGTGCTAAAAGTAGATATACCATATTACCTTGA 678 0.4425 MVFEDTQKSTITDDKITTNPNITNDDADLEEGEILDDAGDSSAAVARNPLENSWTFWFDSPSAKSRQTAWGSSIRNIYTFSTVEDFWGVYNNIIHPSKLAMGADLYCFKHKIEPKWEDPICANGGKWTVSPSRGKADTSWLYTLLAMIGEQFDHGDEICGAVVNVRSKQDKISIWTKNASNEAAQMSIGKQWKEFLDYNDTVGFIFHEDAKKLDRGAKSRYTILP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0383 225 MobiDBLite consensus disorder prediction 1 25 - -
Lal3g0383 225 ProSitePatterns Eukaryotic initiation factor 4E signature. 104 127 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lal3g0383 225 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 223 - -
Lal3g0383 225 MobiDBLite consensus disorder prediction 1 26 - -
Lal3g0383 225 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 223 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lal3g0383 225 Gene3D RNA Cap, Translation Initiation Factor Eif4e 40 223 IPR023398 -
Lal3g0383 225 Pfam Eukaryotic initiation factor 4E 49 202 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lal3g0383 225 SUPERFAMILY eIF4e-like 24 217 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0383 Lal-Chr3 2610099 2612266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0383 1 222 Eukaryotic Initiation Factors Gene Family AT4G18040 61.925 2.43e-107 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0383 K03259 - gmx:100499636 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0383 3 2610099 2612266 Lal3g0383 3 2610099 2612266 ECH
Lal5g1344 5 16109155 16111576 Lal3g0383 3 2610099 2612266 LSH