Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0381 ATGGCACAAGATGAAGGACACAAGGCCAACAAAATCAATGAAAAAGTTCATTTCTACAAGCTGTTCACTTTTGCTGATAGTCTTGATTCGACTTTGATGACCATTGGTGTCATAAGTGCCATAGGAAATGGGTTATCACAACCTCTCATGACCCTCATTTTTGGCAAGCTTATCAATGCCTTTGGTACCACTCATCAATCCAACATTGTTAAGGAAGTCTCTAAGGTTTTATTGCTCTTTGTGTATCTGGCTGTTTGGGCTGGAATTGCCTCATTCCTACAGGTATCATGTTGGATGGTAACAGGAGAAAGACAAGCTGCGAGGATTCGGAGCTTGTACTTGAAAACTATATTAAAACAAGACATTGCATTCTTTGACACTGAAACAAACACTGGAGAGGTTATTGGCAGAATGTCTGGTGACACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGAAAGTTCTTACAACTACTTTCATCCTTTATTGGTGGCTTCATGATTGCTTTTACAAAAGGATGGCAACTCACCGTAGTTTTGCTTGCATGTATTCCTTGTCTTGTCATTGTTGGTGGAATTATGTCTATGATGATGGCCAAAATGTCAGGCCGTGGCCAAACTGCTTATGCAGAAGCTGGAAATGTTGTTGAACAAACACTTGGAGCCATTAGAACAGTTGCATCTTTTACTGGTGAGAAAAAAGCAATAGATAAGTATCATAACAAGCTAAAAGTTGCCTATGTTACAACGGTTCAACAAGGGTTAGCCTCAGGGTTAGGAATGGGACTACTTTTGTTGATTGTCTTCTGCACCTATTCTCTTTCTATGTGGTATGGCTCCAAACTTATCATTGAGAAAGGATACAATGGTGGAGATGTCTTCAATATAATTGTATCTGTTAATAGTGGTGGAATGGCACTTGGTCAGACAACCCCATGCCTTAATGCATTTGCAGCAGGGCAAGCAGCAGCATATAAGATGTTTGAGACAATTAAACGAAAGCCAACAATCGATGCTTATGACACAAATGGTGTTGTTTTGGAAGACATAAAGGGAGATATTGAACTCAAAGATGTTCACTTCAGATACCCTGCAAGGCCAGATATTCAGATCTTCGCCGGATTCTCATTCTACATTCCAAGTGGCACAACTGCTGCTTTAGTTGGTCAAAGTGGGAGTGGGAAGTCCACTATAATCAGTTTATTAGAGAGATTCTATGATCCTGATTCTGGAGAAGTACTTATAGATGGTGTGAATCTGAAGAGTTTTCAAGTTAGATGGATAAGAGAACAAATTGGGCTTGTTGGCCAAGAACCTGTCTTGTTTGCAGCCAGTATCAAAGAGAACATAGCATATGGCAAAGAAGGTGCAACTGATGAGGAGATAACAACTGCAATAACACTTGCCAATGCCAAAAAGTTCATTGACAAGCTACCTCAGGGCATTGATACAAGGATAGGAGGTAATGGTACTTCACTTTCAGGTGGGCAAAAGCAAAGAATCGCTATTGCAAGGGCAATTTTAAAGAACCCCAAAATCCTTCTTCTTGATGAAGCAACTAGTGCATTAGATGCTGAGTCTGAAAGAATAGTTCAAGAAGCATTAGAACAAGTCATGTCAAACAGGACAACCGTAGTCGTTGCACATCGTTTGACAACTATTAGAAATGCTAACACCATAGCAGTTGTTCATCAGGGGAAAATTGTGGAAAAAGGAACTCACGACAAATTAATCAAGGATGTCAATGGTGCTTATTCTCAGCTTATTCGTCTACAAGAAGGAGCTAAGGAAACCGATAGACAACAAAATTATGAAGTCGATAAGACAAATAACAGTTTTAATTTAGATAGTCACACTCACATGTCTAGATCTTCCCCCCAGAGGACATCCTTTATGAGATCAATAAGCCAAAGTTCATCAGGCAGAAGACAGTCTCTCTCACTTAGCATCGGTATTCCTTACCCACTTGGTGCGCTTGAATATACAGAACGGGATAGTGAGGATCTTGAAAGTAATGAACTTGATAATAAGAAGAGCCAGAACGTCTCTATCAAACGTTTGGCTAAGTTGAACAAGCCTGAGATTCCTGTCCTAATACTAGGATCCATTGCTGCTGCAGTGCATGGTGTTGTTTTACCTATATTTGGCCTCTTGCTATCATCAGCTATTAGTACTTTCTATAAACCTCCAGAACAACTTCGAAAAGATTCTGAGTTTTGGTCATTGCTATTTGTTGGCTTGGGGATTGTTACTCTCGTGGCCTTATCAATACAAAACTACCTATTTGGAATTGCTGGTGGAAAACTTATAGAACGAATTCGATCATTAACATTTCAAAAGGTTGTGCACCAAGAAATCAGTTGCGGGGCAGTCAGTGCAAGGTTAGCTACAGATGCTTCAACAGTAAGAAGTCTTGTTGGTGACACTCTAGCTCTCATTGTGCAAAACATAGCAACAACCACAGCTGGTTTAGTTATAGCATTCTCAGCTAATTGGATACTCGCTATTGTGATCCTGGCCGTTTCACCTTTGTTGCTTATACAAGGATACATTCAGACCAAGTTTTTAAAAGGATTCAGTGCTGATGCAAAGGTAAAGTATGAAGAGGCAAGTCAAGTGGCAAACGATGCTGTTGGTAGCATTAGAACAATTGCTTCATTCTGTGCTGAACAGAAAGTGATGAATATGTACGACACAAAATGTTCTGGGCCAGCAAAACAAGGTGTTCGGCTGGGGCTTGTTAGTGGTGTAGGACTTGGTGTCTCTTTTTTTGTTTTATACTGCACAAATGCTCTATGTTTCTACATAGGATCTATACTTGTGCAACATGGAAAAGCAACTTTTGGAGAGGTTTTCAAGGTTTTCTTTGCTTTAACAGTTACAGCAATAGGTGTTTCCCAGTCTAGTGCCCTGGCACCAGATACAAACAAGGCCAAAGACTCCGCAGCTTCAATATTTGAAATTCTTGACACAAAGCCAGCCATTGACTCAAGCAGCAATGAGGGCATAACACTAGAAATTGTAAAAGGTGATATTGAACTTCAACAAGTCCACTTTAAGTATCCAACAATGCCTGATATTCAAATATTCAAAGATTTGTGTCTAAGCATCCCAGCTGGAAAGACTGTTGCATTGGTTGGAGAAAGTGGGAGTGGAAAATCAACAGTTATAAGCCTCTTGGAGAGATTCTATAACCCCGATTCAGGACGGGTACTAATAGACGGAGTGGATATAAAAAAGTTCAGACTAAGCTGGTTGAGGCAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAATGAAAGCATTAGGTCCAACATAGCATATGGCAAAGAAGGAGGTGCAACAGAGGAAGAGATAATTGCAGCAGCACAAGCAGCCAATGCACACAGGTTCATAAGTTCTCTTCCAAATGGTTATGAAACATCTGTTGGGGAAAGAGGCACACAATTATCGGGAGGACAAAAGCAACGTATAGCGATTGCAAGAGCCATGCTTAAAGACCCGAAAATCCTTTTACTTGATGAGGCAACTAGTGCACTTGATGCCGAATCGGAGCGCATAGTTCAAGAGGCTATTGACAAAGTGAGTGAAAACAGAACTACAGTTGTTGTAGCTCACCGTCTTGGAACAATTAAAGGGGCTGACATTATAGCAGTAGTAAAAAATGGTGTGATTGCTGAGAAGGGAAGACATGAAGTGTTGCTTAAGATTGATGGTGGAGTTTATGCTTCATTGGTAGCTCTTCATATGACTGCATCATAA 3771 0.4044 MAQDEGHKANKINEKVHFYKLFTFADSLDSTLMTIGVISAIGNGLSQPLMTLIFGKLINAFGTTHQSNIVKEVSKVLLLFVYLAVWAGIASFLQVSCWMVTGERQAARIRSLYLKTILKQDIAFFDTETNTGEVIGRMSGDTILIQDAMGEKVGKFLQLLSSFIGGFMIAFTKGWQLTVVLLACIPCLVIVGGIMSMMMAKMSGRGQTAYAEAGNVVEQTLGAIRTVASFTGEKKAIDKYHNKLKVAYVTTVQQGLASGLGMGLLLLIVFCTYSLSMWYGSKLIIEKGYNGGDVFNIIVSVNSGGMALGQTTPCLNAFAAGQAAAYKMFETIKRKPTIDAYDTNGVVLEDIKGDIELKDVHFRYPARPDIQIFAGFSFYIPSGTTAALVGQSGSGKSTIISLLERFYDPDSGEVLIDGVNLKSFQVRWIREQIGLVGQEPVLFAASIKENIAYGKEGATDEEITTAITLANAKKFIDKLPQGIDTRIGGNGTSLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEQVMSNRTTVVVAHRLTTIRNANTIAVVHQGKIVEKGTHDKLIKDVNGAYSQLIRLQEGAKETDRQQNYEVDKTNNSFNLDSHTHMSRSSPQRTSFMRSISQSSSGRRQSLSLSIGIPYPLGALEYTERDSEDLESNELDNKKSQNVSIKRLAKLNKPEIPVLILGSIAAAVHGVVLPIFGLLLSSAISTFYKPPEQLRKDSEFWSLLFVGLGIVTLVALSIQNYLFGIAGGKLIERIRSLTFQKVVHQEISCGAVSARLATDASTVRSLVGDTLALIVQNIATTTAGLVIAFSANWILAIVILAVSPLLLIQGYIQTKFLKGFSADAKVKYEEASQVANDAVGSIRTIASFCAEQKVMNMYDTKCSGPAKQGVRLGLVSGVGLGVSFFVLYCTNALCFYIGSILVQHGKATFGEVFKVFFALTVTAIGVSQSSALAPDTNKAKDSAASIFEILDTKPAIDSSSNEGITLEIVKGDIELQQVHFKYPTMPDIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPDSGRVLIDGVDIKKFRLSWLRQQMGLVGQEPILFNESIRSNIAYGKEGGATEEEIIAAAQAANAHRFISSLPNGYETSVGERGTQLSGGQKQRIAIARAMLKDPKILLLDEATSALDAESERIVQEAIDKVSENRTTVVVAHRLGTIKGADIIAVVKNGVIAEKGRHEVLLKIDGGVYASLVALHMTAS 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0381 1256 CDD ABC_MTABC3_MDL1_MDL2 1013 1249 - -
Lal3g0381 1256 Pfam ABC transporter transmembrane region 699 963 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g0381 1256 Pfam ABC transporter transmembrane region 33 301 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g0381 1256 Gene3D - 1004 1255 IPR027417 -
Lal3g0381 1256 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 700 978 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g0381 1256 SUPERFAMILY ABC transporter transmembrane region 686 994 IPR036640 GO:0005524|GO:0016021
Lal3g0381 1256 MobiDBLite consensus disorder prediction 610 645 - -
Lal3g0381 1256 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 11 1253 IPR039421 -
Lal3g0381 1256 CDD ABC_6TM_Pgp_ABCB1_D2_like 689 996 - -
Lal3g0381 1256 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 11 1253 - -
Lal3g0381 1256 Gene3D - 353 606 IPR027417 -
Lal3g0381 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 344 593 IPR027417 -
Lal3g0381 1256 ProSitePatterns ABC transporters family signature. 1153 1167 IPR017871 GO:0005524
Lal3g0381 1256 CDD ABC_6TM_Pgp_ABCB1_D1_like 33 316 - -
Lal3g0381 1256 Gene3D ABC transporter type 1, transmembrane domain 89 983 IPR036640 GO:0005524|GO:0016021
Lal3g0381 1256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 355 591 IPR003439 GO:0005524
Lal3g0381 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1002 1251 IPR027417 -
Lal3g0381 1256 CDD ABC_MTABC3_MDL1_MDL2 355 593 - -
Lal3g0381 1256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1013 1250 IPR003439 GO:0005524
Lal3g0381 1256 ProSitePatterns ABC transporters family signature. 494 508 IPR017871 GO:0005524
Lal3g0381 1256 SUPERFAMILY ABC transporter transmembrane region 21 339 IPR036640 GO:0005524|GO:0016021
Lal3g0381 1256 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 35 320 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g0381 1256 Pfam ABC transporter 376 522 IPR003439 GO:0005524
Lal3g0381 1256 Pfam ABC transporter 1032 1181 IPR003439 GO:0005524
Lal3g0381 1256 SMART AAA_5 1040 1233 IPR003593 -
Lal3g0381 1256 SMART AAA_5 382 574 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0381 Lal-Chr3 2597008 2602521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0381 16 1252 Calmodulin-binding Proteins AT2G36910 45.231 0.0 1056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0381 3 2597008 2602521 Lal3g0381 3 2597008 2602521 ECH