Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0377 ATGAATGTGAGAAAGAGGATGGAAGAAAGAGCCTTATTGAGATACTTTTTAGTTGAGCCTAAGCAAATTCATGAGATTAAGGATTTCCTTCTAACTGCTAGAAGGAAAGATGCTAGATCAGTTAAAATCAAGAGGAGCATACATGTTGTTAAGTTCAAGGTTCGATGCTCCAAGTACCTTTACACTCTTTGTGTCTTTGATACCGAAAAAGCCGATAAGTTGAAGCAATCTCTTCCGCCGGGTTAG 246 0.3862 MNVRKRMEERALLRYFLVEPKQIHEIKDFLLTARRKDARSVKIKRSIHVVKFKVRCSKYLYTLCVFDTEKADKLKQSLPPG 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0377 81 Gene3D - 20 81 IPR038464 -
Lal3g0377 81 PANTHER 60S RIBOSOMAL PROTEIN L38 20 81 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lal3g0377 81 Pfam Ribosomal L38e protein family 20 81 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lal3g0377 81 PANTHER - 20 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0377 Lal-Chr3 2579747 2581151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0377 20 81 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 91.935 3.02e-37 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0377 K02923 - var:108325348 122.479