Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0376 ATGAGACTTTCTTCAGCTAGTTTTAGTCCTCCACCCCAGGAAGGGGAAAAGAGATGTCTAGATTCAGAACTTTGGCATGCATGTGCTGGACCTCTTGTTTCATTACCAGCACTTGGAAGCCGTGTGGTTTACTTTCCACAAGGTCACAGTGAGCAAGTGGCTGTGTCAACCAACAAGGAAGTGGATGCTCATATCCCCAACCATCCGACCTTACCACCGCAACTCATTTGTCAGCTTCATAATCTGACTATGCATGTATGGCTTGTTTACTTACTTTTTACTGTAGCGGATGCTGAGACTGATGAAGTGTATGCGCAGATGACCTTGCAACCTCTGAATCCTCAAGAGCAAAAGGAGGCATACCTTCCAGCAGAGTTGGGCACTCCAAGTAAACAGCCGACAAACTACTTCTGCAAAACATTGACTGCCAGTGACACAAGTACTCATGGGGGATTCTCTGTTCCTCGCCGAGCAGCTGAAAAAGTGTTTCCTCCATTGGACTTTTCCCAACAACCTCCTTGCCAAGAGTTAATTGCAAGGGATTTGCACGGTAATGAATGGAAATTCAGGCATATCTTCCGAGGCCAGCCCAAAAGGCATCTTCTTACAACGGGATGGAGTGTTTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATGCTGTGCTGTTTATCTGGCAATGTATTTTCTTCAATAGGAATGATAAGAACCAATTGCTTCTTGGTATCCGGCGGGCTAATCGACCACAAACTGTGATGCCTTCTTCAGTTTTGTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCAGCAGCTCATGCAGCTGCAACAAATAGCCGTTTCACCATTTTCTATAACCCACGTGCTAGCCCATCAGAATTTGTCATACCCTTAGCGAAGTATGTTAAAGCTGTGTATCACACTCGAGTCTCGGTTGGCATGCGCTTCAGGATGTTGTTTGAAACAGAGGAGTCAAGTGTGCGGCGATACATGGGTACAATAACTGGCATTAGTGACTTGGATCCTGTCCGGTGGCCAAATTCACATTGGCGTTCAGTCAAGGTTGGTTGGGATGAATCCACTGCGGGAGAGAGGCAACCTAGAGTGTCTCTATGGGAAATTGAGCCACTAACAACCTTTCCCATGTATCCATCGCCATTCCCCCTTAGGCTTAAACGACCGTGGCCTCCAGGACTGCCTTCATTCCATGGCATGAAGGACGAAGATTTTGGCATAAATTCTCCAATGTTGTGGCTTCCAGACCCTGATAGAGGGCTTCAGTCTATTAATTTTCAGGGGATGGGAGTTAATCCTTGGATGCAACAAAGATATGATCCCTCCATGCTCAATATGCAAAGAGATATGTATCAAGCTGCGGCCGCTGCTGCATTCCAGGATATGAGGACTATAGATCCTTCCAAACAACATCCTGCTCCCTTAGTTCAATTTCCGCAATCACAAAACTTCCCGAACAGGACTGCTGCTTTAATGCAGGCCCAGATGTTGCAGCAGTCACAGTCGCAGCAGCAGGCTTTTCAAAATAATCAAGAGAATCAGCAGACGTCTCAATCTCAGGCACAAACTCATATACATCTTCAGCAGCAGCTACAGCATCAGCACTCATTCAATAGTCAGCATGAGCATCATCACAACAAGCAACAACAACAAACGCAACAACAACAGCAGCAGCAGCTACCACAGCAAATGGTAGATAATCAGCAGATTTCCAATGTCGTCTCTACAATGTCACAGTTTGTTTCGGCACCTCAATCTCAATCATCACCTATGCAAGCTTTTGTTTCACTGTCCCAACAACAAACATTTTCTGATTCCAGTGGGAACCCTACCACTATTGTTTCTCCTCTGCACAGTATCTTGGGTTCATTTCCCCAGGATGAAAATTCGCACCTTCTGAACCTTCCTACAACAAACTCTTGGGTTCCGGTTCAGACTTCTACTGCATGGCCACCCACCAAACGTGTTGCAGTGGATCCTCTCCTTTCTTCTGGAATATCTCAATGTGTGCCGCACATTGATCGGGTAGGGCAGCCACTGAGTAACATGTCACAAAATGGTATTACATTGCCCCCATTTCCTGGTAGGGAGTGCTCACTAGACCAAGAAGGGAGCAATGATCCACAAAACCATCTTTTATTTGGTGTTAATATAGAGCCCTCATCACTTCTAGTGCAAAATGGAATGACAAGCCTTAAGGGAGTCGGCAACAACAGTGACTCCTCAACCATGCCATTTCAATCTTCTAATTTCCTCAATAACATAGGCACTGATTCTTCATTGAATCCTGGAATGACACATAGCATTGGTGATTTGGGCTTCCTGCAGACCAAAGAAAATTTGGGGCAGGGAAACTCATCAAACAAGACCTTTGTGAAGGTTTATAAGTCAGGGTTCCTCGGAAGATCATTAGATATCACTAAATTCAGCAGCTACCATGAGCTACGCAGTGAACTTGCTCGTATGTTTGGCCTTGAAGGCGAGCTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGACGTCCTTCTCCTTGGCGATGGCCCTTGGCCGGAATTCGTAAATAGTGTATGGTGTATCAAGATACTTTCACCTCAGGAGGTGCAGCAGATGGGCAACACTGGCCTTGAGCTTCTGAATTCGGTTCCAATTCAAAGGCTCTCTAATGGCATCTATGATGACTACATAAGCCGTCAGGACCCAAGAAGTTTAAGCAGTGGAATAACAAGTGTGGGGTCTATAGAATACTAG 2781 0.4585 MRLSSASFSPPPQEGEKRCLDSELWHACAGPLVSLPALGSRVVYFPQGHSEQVAVSTNKEVDAHIPNHPTLPPQLICQLHNLTMHVWLVYLLFTVADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFIWQCIFFNRNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDEDFGINSPMLWLPDPDRGLQSINFQGMGVNPWMQQRYDPSMLNMQRDMYQAAAAAAFQDMRTIDPSKQHPAPLVQFPQSQNFPNRTAALMQAQMLQQSQSQQQAFQNNQENQQTSQSQAQTHIHLQQQLQHQHSFNSQHEHHHNKQQQQTQQQQQQQLPQQMVDNQQISNVVSTMSQFVSAPQSQSSPMQAFVSLSQQQTFSDSSGNPTTIVSPLHSILGSFPQDENSHLLNLPTTNSWVPVQTSTAWPPTKRVAVDPLLSSGISQCVPHIDRVGQPLSNMSQNGITLPPFPGRECSLDQEGSNDPQNHLLFGVNIEPSSLLVQNGMTSLKGVGNNSDSSTMPFQSSNFLNNIGTDSSLNPGMTHSIGDLGFLQTKENLGQGNSSNKTFVKVYKSGFLGRSLDITKFSSYHELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNTGLELLNSVPIQRLSNGIYDDYISRQDPRSLSSGITSVGSIEY 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0376 926 MobiDBLite consensus disorder prediction 553 568 - -
Lal3g0376 926 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 906 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lal3g0376 926 SUPERFAMILY CAD & PB1 domains 787 868 - -
Lal3g0376 926 Gene3D - 788 882 - -
Lal3g0376 926 MobiDBLite consensus disorder prediction 497 540 - -
Lal3g0376 926 SMART B3_2 137 246 IPR003340 GO:0003677
Lal3g0376 926 Pfam B3 DNA binding domain 137 245 IPR003340 GO:0003677
Lal3g0376 926 Gene3D - 135 245 IPR015300 -
Lal3g0376 926 Pfam Auxin response factor 270 353 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lal3g0376 926 Pfam AUX/IAA family 786 878 IPR033389 -
Lal3g0376 926 MobiDBLite consensus disorder prediction 497 568 - -
Lal3g0376 926 CDD B3_DNA 136 225 IPR003340 GO:0003677
Lal3g0376 926 Gene3D - 308 380 - -
Lal3g0376 926 PANTHER AUXIN RESPONSE FACTOR 1 906 - -
Lal3g0376 926 SUPERFAMILY DNA-binding pseudobarrel domain 122 273 IPR015300 -
Lal3g0376 926 ProSiteProfiles PB1 domain profile. 793 877 IPR000270 GO:0005515
Lal3g0376 926 ProSiteProfiles B3 DNA-binding domain profile. 137 246 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0376 Lal-Chr3 2570152 2576545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0376 1 500 B3 DNA Binding Superfamily AT1G30330 82.178 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lal3g0376 AUX_IAA 2e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0376 - - gmx:100798719 1446.8