Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0369 ATGTTAGAAACTAGTTCTGGCCGTGATTCTGAGCTCAGCTTAGATACTCTTAATTCCTCCACACAACGTTCTTCAATGAGCAATGAAAGCATTTGCAGCACCAGTTTCAGCCGTCTCTCCTTCGATAACCTTCCTACTTCGCCGGAATCTAATCTTTCCGTTAAGCCTCATCGCTCCTCCGATTTCGCCTACTCCGCCATCCGCCGCAAGTCTTCCCTCACCTTCCGTGACTTCCATCTCCTCCGCCGCATCGGTGCCGGTGACATCGGCACCGTCTACCTCTGCCGCCTACGAACCACCGATGACGACTTCGACAACGTTGTGGACGGCGGTGACTCCGGGTGTTTCTACGCTATGAAGGTGGTGGATAAAGAAGCCGTGGTTTTGAAGAAAAAAGAACAGAGAGCTGAGATGGAGAGAAAGATTCTGAAGATGCTGGATCATCCTTTTCTCCCTACGCTTTACGCTGAGTTCGAAGCATCGCATTTTTCTTGCATTGTTATGGAGTTTTGTTCTGGCGGTGACTTACACTCGCTCCGTCATAACCACCCTCATAGACGCTTCCCTCTCAACTCCGCAAGGTTTTATGCGGCTGAAGTACTGGTGGCATTAGAGTACCTTCACATGTTGGGAATCATTTATAGAGATCTAAAGCCTGAGAACGTGTTGGTGAGATCGGACGGTCACATCATGCTTTCTGATTTTGATCTCTCGCTCTGTTCTGATGCAATCCCAGCCGTTGAATCACATGATGATAATCCTGCATTCTCACCGTACAACCGTTCTAATATTATTACTCCTTTCTCATGTCTGTCAAATCGACTATTCCGGTCCAGGAAGGTCCAAACGGTTCAACCAAACCGGTTATTTGTTGCTGAACCGGTTGGTGCAAGGTCTTGTTCTTTTGTTGGGACTCATGAATACGTGTCACCGGAAGTTGCTTCAGGTAATTCACACGGTAACGCCGTTGACTGGTGGTCGTTTGGGATATTCATTTATGAGCTTATGTACGGTCGTACTCCGTTTGCGGGACCATCGAATGAGGCTACACTGCGCAACATCATAAACAAACCTCTCACCTTCCCTACTTCTATATCATCCACCTCGCTTGAGCTTCACGCGCGGGACCTCGTTTCAGGGTTGCTTAAAAAAGACCCCAACCGGAGGCTCGGATCGAAGCGTGGCGCTGCTGATGTCAAGAAGCATCCTTTCTTTCAAGGGCTTAATCTTGCGCTCATTAGGATGCTGACTCCGCCGGAGGTGCCGTGCCTGAGAAGGAACAAAACGACGCCGTTGGTTCCGGTTCAGGGAAATAGCAATAGAAGTGGTGGTAGTAGTAGTAGTAGTCGGAGGATGAAGCCAACGACGTCGTTTGATTACTTTTGA 1386 0.4877 MLETSSGRDSELSLDTLNSSTQRSSMSNESICSTSFSRLSFDNLPTSPESNLSVKPHRSSDFAYSAIRRKSSLTFRDFHLLRRIGAGDIGTVYLCRLRTTDDDFDNVVDGGDSGCFYAMKVVDKEAVVLKKKEQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHNHPHRRFPLNSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESHDDNPAFSPYNRSNIITPFSCLSNRLFRSRKVQTVQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYELMYGRTPFAGPSNEATLRNIINKPLTFPTSISSTSLELHARDLVSGLLKKDPNRRLGSKRGAADVKKHPFFQGLNLALIRMLTPPEVPCLRRNKTTPLVPVQGNSNRSGGSSSSSRRMKPTTSFDYF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0369 461 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 460 - -
Lal3g0369 461 PANTHER FLIPPASE KINASE 1-RELATED 1 460 - -
Lal3g0369 461 CDD STKc_phototropin_like 76 422 - -
Lal3g0369 461 SUPERFAMILY Protein kinase-like (PK-like) 56 426 IPR011009 -
Lal3g0369 461 Gene3D Transferase(Phosphotransferase) domain 1 175 423 - -
Lal3g0369 461 ProSiteProfiles Protein kinase domain profile. 78 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0369 461 MobiDBLite consensus disorder prediction 431 461 - -
Lal3g0369 461 MobiDBLite consensus disorder prediction 428 461 - -
Lal3g0369 461 Pfam Protein kinase domain 300 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0369 461 Pfam Protein kinase domain 78 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0369 461 SMART serkin_6 78 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0369 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lal3g0369 461 Gene3D Phosphorylase Kinase; domain 1 78 429 - -
Lal3g0369 461 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0369 Lal-Chr3 2516665 2518569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0369 9 461 AGC Kinase Gene Family AT2G34650 64.847 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal3g0369 Pkinase 6.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0369 - - gmx:100795536 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0369 3 2516665 2518569 Lal3g0369 3 2516665 2518569 ECH
Lal5g1358 5 16251712 16253707 Lal3g0369 3 2516665 2518569 LSH