Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0363 ATGGAGGAGGATGATGAGATTCAAGCTTGTCAACAGGCATGTAAGTTTCCAAGAGTTGGAAATAAAAGAAATGAGTCTAGCAAATTAGGTGGTGATGGTGGTAGTGGAACCACAAACTGTTTCCACAGTGGCAGTAATTGGAACAATTCTTCAAGAATTGTGAGGGTATCTAGAGCCTCTGGTGGAAAAGATAGGCACAGCAAGGTTATGACTTCAAAGGGGTTAAGAGACAGAAGGGTTAGGCTTTCTGTGACCACAGCCATTCAATTCTATGACCTTCAAGATAGACTTGGTTATGAACAACCTAGCAAAGCAGTTGAGTGGTTAATCAATGCTGCTTCAGATGCAATTTCAGAACTCCCTCCTCTCAACACCACTTTCCCTGATACCCCAAATCAACCAAGTGATGAGAAAATGCCATGTTTTGATGAGGTAGATGGTGACACAAACAACTATCAAAACCAAAGCCAAAGCCAAAACCTTTCTTTGTCCAAGTCTGCTTGTAGCAGCACTTCAGAGACAAGCAAAGGTTCTGGCTTATCCTTATCAAGGTCTGAGATTCGTGTTAAAGAGAAGGAAAAAGCAGCAAAGGATAAAGAAAAAGAAAATGAGGCATCTCAAGTTGCACATCATCATCATCATCAGCATCACAATGTGACCCAAACTGCTTCTTTCACTGAGCTTCTCACTGGAGGATTTGGTAATGTTGCTACCACTACAACAAGTCCTAATGGTGCAGCAGGTGATGAGACTAATCTATTCAACAAGGCAAAACAATGGTCACATATGGCCATGGACTACTTCAACTCAGGCCTTATTGTAGGTCCATCATCATCTTCAAGAAATGTTTCACCATTTAGTGCTGAAAACCAATCAGAACAGCTTCAGCATTTCCCTTTCATTCCTGACCATAATTTCATACCTTCTTCTCAGTCAAGTGGAAATGATTACAATCTCAACTTCACAATTTCTCCTGGCCTAGCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCTCCATCTCATATTATGCCTCATATGCAATTCTCTGGATCAACCAATCTACCTTTCTTCATAGGAGGAGAAGCTTCTCATTCAGCTTCTGCTGCTCCAACCATGGATGCTACTAACCATCACCACCACCAACAACAACAACAACTTCAGTTCTCACCTGTGTTTGATGGACGCTTGCAAATCTGCTATGAAGATGGAACCAGGCATTCAGACCAGAAGGGGAAAGCCAAGAACTGA 1251 0.4205 MEEDDEIQACQQACKFPRVGNKRNESSKLGGDGGSGTTNCFHSGSNWNNSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYEQPSKAVEWLINAASDAISELPPLNTTFPDTPNQPSDEKMPCFDEVDGDTNNYQNQSQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVKEKEKAAKDKEKENEASQVAHHHHHQHHNVTQTASFTELLTGGFGNVATTTTSPNGAAGDETNLFNKAKQWSHMAMDYFNSGLIVGPSSSSRNVSPFSAENQSEQLQHFPFIPDHNFIPSSQSSGNDYNLNFTISPGLAGYNRGTLQSNSPSHIMPHMQFSGSTNLPFFIGGEASHSASAAPTMDATNHHHHQQQQQLQFSPVFDGRLQICYEDGTRHSDQKGKAKN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0363 416 MobiDBLite consensus disorder prediction 119 133 - -
Lal3g0363 416 MobiDBLite consensus disorder prediction 147 182 - -
Lal3g0363 416 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 416 IPR005333 GO:0003700
Lal3g0363 416 Pfam TCP family transcription factor 61 205 IPR017887 -
Lal3g0363 416 ProSiteProfiles TCP domain profile. 62 120 IPR017887 -
Lal3g0363 416 Coils Coil 182 209 - -
Lal3g0363 416 MobiDBLite consensus disorder prediction 185 209 - -
Lal3g0363 416 MobiDBLite consensus disorder prediction 369 385 - -
Lal3g0363 416 MobiDBLite consensus disorder prediction 366 385 - -
Lal3g0363 416 PANTHER TRANSCRIPTION FACTOR TCP24 4 416 - -
Lal3g0363 416 Gene3D - 64 269 IPR036188 -
Lal3g0363 416 MobiDBLite consensus disorder prediction 119 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0363 Lal-Chr3 2465820 2467070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0363 45 416 TCP Transcription Factor Family AT4G18390 43.932 8.69e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal3g0363 TCP 5.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0363 - - lang:109333568 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0363 3 2465820 2467070 Lal3g0363 3 2465820 2467070 ECH