Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0362 ATGAGGAGAAATTGCAACTTAGAACTTGCTCTTTTTCCTTCCCATGGTTCTGATCATCACCACAGCAACCACTCAATAATGGAAGAATCTTGTGGGATCCCAAAGCTTCAACACCTCCATCAACAACAACAACAACGGCAGCAGGAACAACACAACACTCTTACTATTTTCTATGATGGAAAGATTTGCGTTTCTGATGTCACAGAGTTTCAGGCCAAATCCATCATATTTCTTGCAAATAAAAAAATGGAGGAAAGAATGAAGACACAAAGTGGGTTAGAGCCATCTACACCAACAGTAGTTGAATCTCATCAACCATTGTATAGTCCTGCCACTCCCCTTTCAATGAAAAGATCACTGCAACGGTTCCTTCAGAAGAGAAAGAATAGGAAACAAGAAGCATCTCCATACAATCACTAG 420 0.4024 MRRNCNLELALFPSHGSDHHHSNHSIMEESCGIPKLQHLHQQQQQRQQEQHNTLTIFYDGKICVSDVTEFQAKSIIFLANKKMEERMKTQSGLEPSTPTVVESHQPLYSPATPLSMKRSLQRFLQKRKNRKQEASPYNH 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0362 139 Pfam Jas motif 117 137 IPR018467 -
Lal3g0362 139 PANTHER - 1 139 - -
Lal3g0362 139 MobiDBLite consensus disorder prediction 86 114 - -
Lal3g0362 139 Pfam tify domain 49 80 IPR010399 -
Lal3g0362 139 SMART tify_2 47 81 IPR010399 -
Lal3g0362 139 ProSiteProfiles Tify domain profile. 47 81 IPR010399 -
Lal3g0362 139 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 139 IPR040390 -
Lal3g0362 139 MobiDBLite consensus disorder prediction 90 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0362 Lal-Chr3 2449037 2451322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0362 1 137 Tify Gene Family AT1G30135 39.568 1.41e-22 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal3g0362 tify 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0362 - - gmx:100500349 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0362 3 2449037 2451322 Lal3g0362 3 2449037 2451322 ECH
Lal5g1367 5 16323732 16326983 Lal3g0362 3 2449037 2451322 LSH