Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0360 ATGGGGAAGCTAATAACTACTTCCAAACCTCTCATCCTCCAATCAAAACTTCTCTGTTTTTCTCTTCTCTATCTTTTCACTACTCTCTTCCTTGCACTTTACACCACTTTGTCTCAATCCAAATGCTTCTTCAGATCATCCCCATTGGATCCAATTCAAAATTCTCTCTTCTCTTACCCTTCTTCCTATGGAGAACACAAATATGCTGTCTCAACCACCCGTTCTACATGCTCTTCCCCTGTTTATTTTTCAGATTACTGGGATATTGTGAAGGAGATAAGAAATTGGCACAACAAATTTTCAGCTTATTCAATTCCCCTGAGGTATATGCAGGGAAATGGTGATAGTTTTGGTGGGAATCTCAGCACCTCTGTGAGGTTTTCTTATTTCGATAATCACACTGATGGCAAAGAAGTTCCCTGTGGATTTTTCAAGAAATTTCCCATCAGTGATTCTGATCGAAATGCAATGGAAAAGTGTGACAGTGTAGTTATAGTTTCAGCAATCTTCAATGACCATGACAAAATTCGGCAACCAAAGGGCCTTGGTTCCAAAACACTAGAAAATGTGTGTTTCTTCATGTTTGTAGACGATGTTACACTCAAAGGTCTTGAACATCATGGATTGATTTCACCAAATTCGAGAGAATACAAGATAGGTGTATGGAGGCTTGTGAAGGTTGCAAAAGAAGATTTGTATGAGAACCCAGCAATGAATGGAATTATACCAAAATATTTAGTACATAGGCTATTCCCAAATTCAAAATTCAGTATTTGGATAGATGCAAAGTTGCAACTTGTGGTTGATCCATTGTTGTTGATTCATTCACTTGTTATATCTGTGAATGTAGACTTGGCCATATCAAATCATCCTTATTATGTTCATACCATGGAAGAAGCAATGGCAACCGCGAGGTGGAAGAAATGGTTGGATGTCAATGCCTTGAAGCTGCAAATGGAGACATATTGTGAACATGGATTGCAACCATGGAGTCCAAGCAAGAAGCCCTATGTCTCAGATGTACCAGACAGTGCTCTAATCTTGAGGAAGCATGACCTAGGCAGTAACCTCTTCTCATGTCTTATGTTCAATGAATTGGATGCATTTAACCCAAGAGACCAATTACCTTTTGCATTTGTTAGAGATAAAATGAAACCCAACTTGAAGATAAACATGTTTGATGTGGAAGTGTTTGAACAAGTGACAGTGGAATACAGGCACAACCTCAAACGTATCGAAGGGACCACTTCTTCTACTGCCAAAAAATTGTCCCCTTCAGGAAGAACCAAAAGGGCACACCCAGATTTGTTTTATGTGAATGGCAGCTGTTGTGGAAAGTGCCAGAATTATCTTTCCATTATGTGGGGTCAAGAAGAATCAAATGATTGA 1389 0.3909 MGKLITTSKPLILQSKLLCFSLLYLFTTLFLALYTTLSQSKCFFRSSPLDPIQNSLFSYPSSYGEHKYAVSTTRSTCSSPVYFSDYWDIVKEIRNWHNKFSAYSIPLRYMQGNGDSFGGNLSTSVRFSYFDNHTDGKEVPCGFFKKFPISDSDRNAMEKCDSVVIVSAIFNDHDKIRQPKGLGSKTLENVCFFMFVDDVTLKGLEHHGLISPNSREYKIGVWRLVKVAKEDLYENPAMNGIIPKYLVHRLFPNSKFSIWIDAKLQLVVDPLLLIHSLVISVNVDLAISNHPYYVHTMEEAMATARWKKWLDVNALKLQMETYCEHGLQPWSPSKKPYVSDVPDSALILRKHDLGSNLFSCLMFNELDAFNPRDQLPFAFVRDKMKPNLKINMFDVEVFEQVTVEYRHNLKRIEGTTSSTAKKLSPSGRTKRAHPDLFYVNGSCCGKCQNYLSIMWGQEESND 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0360 462 Pfam Protein of unknown function (DUF616) 113 407 IPR006852 -
Lal3g0360 462 PANTHER OS01G0210400 PROTEIN 1 457 - -
Lal3g0360 462 PANTHER ALKALINE CERAMIDASE-RELATED 1 457 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0360 Lal-Chr3 2402891 2406552 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1374 5 16418791 16422514 Lal3g0360 3 2402891 2406552 LSH
Lal3g0360 3 2402891 2406552 Lal19g0787 19 12011330 12020853 PCT