Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0310 ATGATGGCTGATCATAGAAAAAAGTCCTCTGTGGATGTAGACTTCTTTACAGAATATGGTGAAGGGAGCAGATACAGAATTGAGGAAGTAATAGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCCACTCGCATTCTTCGAGAAATCAAGCTTCTTAGACTCTTGCGTCATCCAGATATAGTGGAGATCAAGCATATTTTGTTACCTCCTTCAAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTGCATCAGGTCATCAAAGCTAATGATGATCTGACTCCAGAACATTACCAGTTTTTCCTCTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTTAATGATACACCCACTGCTATATTCTGGACAGACTATGTTGCAACAAGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTCGCAGAACTTTTAACTGGAAAACCTCTTTTCCCTGGGAAGAATGTAGTCCATCAACTGGACCTCATGACTGATCTTCTTGGAACACCATCACTTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTTGTAGATACTTGAGCAGCATGCGTAAGAAGAATCCCATTCCTTTCTCCCAGAAATTTCCTTATGCAGACCCTCGTGCTCTTCGTTTATTAGAGAGAATGTTGGCATTTGAGGCTAAGGATCGTCCTACTGCTGTAGAGGCTCTGGCTGATCCATATTTTAAAGGTTTGGCCAAGGTTGAGAGAGAACCTTCTGCTCAGCCTGTTACCAAGATGGAATTTGAATTTGAGAGACGTAGGATAACAAAGGAAGATGTACGAGAGCTTATATACCGAGAGATTTTGGAGTACCACCCACAGATGTTAAAGGAATTTCTAGAGGGAGCAGAGCCAACAGGTTTCATGTATCCAAGGACACCCTTTGATTTAACAGCCCCATTTCCCATAATTCCTTTTTTTGATAGTGCTGTAGACCAGTTCAAGAAGCGATTTACATATCTTGAGGAGCATTATGGCAAAGGTGGAACTGTTGCTCCACCTGAAAGGCAACATGCATCATCATTACCCAGGGCATGTGTCTTGTATTCGGATAACAAAATACAAAATATGACAGAGGTCATAGATGATCTATCCAAGTGTTGCATCAAAGAAGTTGAGGAACCACCCATAGATAGGAGTACCGGTGTGCAAGCTCCTCACAACGTTCAAGGTGTTGCTGCCAGGCCCGGAAAAGTTGTCGGTTCAGTGATGCGTTATAATAACTGTGGAGTGGCAATGACGGCAGAGGCTGAACCGCGGAGGGGGGTTAGGAACCCATCTGTTTCAGCTCAGAATGCTGCATCAAGCTATCCTAGAAGAAACCCGAGTTGTAAAAACGAAGGCGGAAGATGA 1617 0.4218 MMADHRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSLEAIARVRNEKACRYLSSMRKKNPIPFSQKFPYADPRALRLLERMLAFEAKDRPTAVEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPQMLKEFLEGAEPTGFMYPRTPFDLTAPFPIIPFFDSAVDQFKKRFTYLEEHYGKGGTVAPPERQHASSLPRACVLYSDNKIQNMTEVIDDLSKCCIKEVEEPPIDRSTGVQAPHNVQGVAARPGKVVGSVMRYNNCGVAMTAEAEPRRGVRNPSVSAQNAASSYPRRNPSCKNEGGR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0310 538 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Lal3g0310 538 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Lal3g0310 538 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 486 - -
Lal3g0310 538 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0310 538 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0310 538 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0310 538 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Lal3g0310 538 MobiDBLite consensus disorder prediction 505 538 - -
Lal3g0310 538 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal3g0310 538 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 486 - -
Lal3g0310 538 MobiDBLite consensus disorder prediction 513 530 - -
Lal3g0310 538 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Lal3g0310 538 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0310 Lal-Chr3 2009610 2017064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0310 1 537 MAP Kinase Gene Family AT5G19010 78.623 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal3g0310 Pkinase 2.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0310 - K04371 gmx:100781957 942.184