Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0297 ATGAGTTGCTTACCATGCTGCAAATCTGAAGTTGAATCACCATCTTACACAAAAGTGAAAGGAAAAACCAGAAAAGTTTCAGCAGGAAGGCAAACATTCAAATCAATAGCGGCTGCTATGTCGATTAAAACTGGTAGCAGCAGGAATAGACATATCAATGCAGAGATTCTGAAATATGGGGCTGCACAAAATGATGTAAGAGTATTCACATATGAGGAACTTGCTGCTGCAACAGACAACTTCAGTGCTGATTGTCGTATTGGAGAAGGTGGATTCGGGAATGTCTACAAAGGATACCTAAAAAGCATTGATCAAACTGTAGCTGTAAAGCAACTGAATAGAGAAGGAACACAAGGAACAAGAGAATTTTTCGCCGAGGTTTTGATGTTAAGCTTGGTGAAACACCCAAACCTGGTCAGGCTCCTTGGTTATTGTGCAGAGGATGATAATAGGACTTTAGTTTATGAATACATGTCAAATGGAAGTTTGGAAGATCACCTTCTAGACACAGGTAAAGATAAGGAGACATTGGATTGGCAGAGGAGGATGAAAATAGCCGAGGGAGCAGCTAGAGGACTTGAATACCTGCATAATGGTGCAGATTCATCAGTGATATACCGTGATTTTAAAGCGTCTAATATACTGTTAGATGACGATTTCAATCCAAAGCTATCAGATTTTGGACTTGCTAAGTTGGGTCCAATTGAAGGCACTCGACAAACCAGGGTGCTGGGAACCTTAGGCTATTGTGCACCTGAGTATGCTTCTTCAGGCCAACTATCCACAAAAATAGATATTTATAGTTTCGGAGTTGTGTTTTTGGAGATAATCACTGGTAGGAGGGTAATTGACACAGCAAGATCTACAGAGGAGAAAAACTTGATTGATTGGGCAACACCAATGTTTAAAGACAGAATGAAGTTCACTCTAATGGCTGATCCTTTGTTGAAAGGTAATTTCCCAGTGAAGGGTCTATTTCAAGCTCTAGCAGTGGCAGCAATGTGCCTCCAAGAGGAACCTGACACACGACCTCACATGGATGACGTTGTCACGGCTCTTACGCATCTAACAGCACAAAAACATGGAGAGAAAGACGTTGCCGCTGAATCTATGAAAAGTGCAGGGCATGTTGAGTCTTTTAGAGCTACAACTTCACTTGAAGAGCAAAGGTGTTAG 1176 0.415 MSCLPCCKSEVESPSYTKVKGKTRKVSAGRQTFKSIAAAMSIKTGSSRNRHINAEILKYGAAQNDVRVFTYEELAAATDNFSADCRIGEGGFGNVYKGYLKSIDQTVAVKQLNREGTQGTREFFAEVLMLSLVKHPNLVRLLGYCAEDDNRTLVYEYMSNGSLEDHLLDTGKDKETLDWQRRMKIAEGAARGLEYLHNGADSSVIYRDFKASNILLDDDFNPKLSDFGLAKLGPIEGTRQTRVLGTLGYCAPEYASSGQLSTKIDIYSFGVVFLEIITGRRVIDTARSTEEKNLIDWATPMFKDRMKFTLMADPLLKGNFPVKGLFQALAVAAMCLQEEPDTRPHMDDVVTALTHLTAQKHGEKDVAAESMKSAGHVESFRATTSLEEQRC 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0297 391 ProSiteProfiles Protein kinase domain profile. 81 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0297 391 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 387 - -
Lal3g0297 391 Pfam Protein kinase domain 85 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0297 391 Gene3D Phosphorylase Kinase; domain 1 53 157 - -
Lal3g0297 391 PANTHER OS07G0668900 PROTEIN 1 387 - -
Lal3g0297 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lal3g0297 391 CDD STKc_IRAK 87 356 - -
Lal3g0297 391 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Lal3g0297 391 SUPERFAMILY Protein kinase-like (PK-like) 65 352 IPR011009 -
Lal3g0297 391 Gene3D Transferase(Phosphotransferase) domain 1 158 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0297 Lal-Chr3 1927967 1929981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0297 29 366 Glycoside Hydrolase AT3G07070 57.478 1.22e-131 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal3g0297 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0297 - - gmx:100305361 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1442 5 16990188 16996135 Lal3g0297 3 1927967 1929981 LSH