Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0283 ATGGGTTGTACTGGTAGCAAACTGAAAAAACCTACTTCACAATTTTCAAATGCAAGGAGCTCCAAAAACCGTGATCATAGTTACCACCCCCTTCAATCTTTTGCTACAAAGAAGCAAACATCAATAATAGATGATGAGAATCAGCAACAACAACAGGTTCCAATCACAGAACCTTCTTCACAAAACAAAAGTCTAGTGGTGCAGGAACAAGAACCAGCCATTCTAGGAAAACCCTTTGAAGATATCAAGAAGTACTACATTCTTGGCAGGGAATTTGGTAGAGGGAAATTTGGGGTTACTCATTTATGTACTGAGAAATCAACAGGTTATACTTTTGCTTGTAAAACAGTTTTGAAGAGGAAGCTTGTGTGCAAAGCTGACAAAGAAGATATCAAGAGGGAGATTCAGATTATGCAGCATTTGTCTGGCCAACCAAACATTGTGGAGTTCAAGGGTGCTTATGAGGACCATTATTCGGTGCATCTTGTGATGGAGCTTTGTGCTGGTGGGGAACTTTTTCAGAGGATCATTTCTCAAGGGTACTATTCTGAGAGAGCTGCAGCATCAATTTGTAGAGACATTGTTAATTTTGTCCACACTTGCCACTTCATGGGTGTGTTTCACCTCGATCTAAAGCCGGAGAATTTCTTGCTTTCTACCAAGGGTGGGAATACAACCCTCAAGGCAACTGATTTTGGTTTGTCTATATTCATTGAAGAAGGGAAAGTTTACCGTGATATGGTGGGTAGTCCTTACTATGTTGCTCCTGGAGTATTGCGTTATAGTTATGGAAAGGAAATAGATATTTGGAGTGCAGAAAATGAAAAGGGAATATTTGATGCCATATTGGAAGAACACCCATGGATGAAAAATGGTGGAGAGGTATCTGATAAACCAATTGATAGTGCAGTTCTATCTAGAATGAAACAGCTCAGGTTAATGAATAAGCTCAAGAAGCTTGTATTGCAGGTTATGGCTGAAAATTTAGCTGATGAAGAGATTAATGGTCTCAAAGCCATGTTTGCAAATATGGACACTGACAAAAGCGGCACTATCACCTATGAAGAACTGAGGAAAGGGTTGGCCCAAATTTGGATCAAAATTGCTGATGTTGATGGGAATGGATCAATTGACTATATAGAATTCATCTCAGCTACAATGCATAGACACAGGCTTGAACGAGATGAACAAATTTACACAGCATTCCAGTATTTTGATCAGGATAGCAGTGGCTATATTACTAAAGATGAATTGGAAACTGCTATGACAGAACATGGACTGATTGATGAAGCTACCATAAAGGAAATAATTCATGAGGTCGATAAAGATAATGCGGATTTGACTGAGTATTGTCCTGATTTTTCATACAATCACTTCCATCAATCTTCAATATCCATCCTTGAAGTAGCATGA 1413 0.3892 MGCTGSKLKKPTSQFSNARSSKNRDHSYHPLQSFATKKQTSIIDDENQQQQQVPITEPSSQNKSLVVQEQEPAILGKPFEDIKKYYILGREFGRGKFGVTHLCTEKSTGYTFACKTVLKRKLVCKADKEDIKREIQIMQHLSGQPNIVEFKGAYEDHYSVHLVMELCAGGELFQRIISQGYYSERAAASICRDIVNFVHTCHFMGVFHLDLKPENFLLSTKGGNTTLKATDFGLSIFIEEGKVYRDMVGSPYYVAPGVLRYSYGKEIDIWSAENEKGIFDAILEEHPWMKNGGEVSDKPIDSAVLSRMKQLRLMNKLKKLVLQVMAENLADEEINGLKAMFANMDTDKSGTITYEELRKGLAQIWIKIADVDGNGSIDYIEFISATMHRHRLERDEQIYTAFQYFDQDSSGYITKDELETAMTEHGLIDEATIKEIIHEVDKDNADLTEYCPDFSYNHFHQSSISILEVA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0283 470 ProSitePatterns EF-hand calcium-binding domain. 370 382 IPR018247 -
Lal3g0283 470 SUPERFAMILY Protein kinase-like (PK-like) 84 271 IPR011009 -
Lal3g0283 470 SUPERFAMILY EF-hand 329 444 IPR011992 -
Lal3g0283 470 ProSiteProfiles EF-hand calcium-binding domain profile. 393 428 IPR002048 GO:0005509
Lal3g0283 470 MobiDBLite consensus disorder prediction 45 64 - -
Lal3g0283 470 Pfam EF-hand domain 398 425 IPR002048 GO:0005509
Lal3g0283 470 ProSiteProfiles Protein kinase domain profile. 86 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0283 470 MobiDBLite consensus disorder prediction 7 31 - -
Lal3g0283 470 Pfam Protein kinase domain 88 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0283 470 Gene3D - 279 451 - -
Lal3g0283 470 Gene3D Phosphorylase Kinase; domain 1 87 172 - -
Lal3g0283 470 ProSitePatterns EF-hand calcium-binding domain. 406 418 IPR018247 -
Lal3g0283 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Lal3g0283 470 ProSiteProfiles EF-hand calcium-binding domain profile. 332 367 IPR002048 GO:0005509
Lal3g0283 470 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 39 272 - -
Lal3g0283 470 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 278 446 - -
Lal3g0283 470 SMART efh_1 397 425 IPR002048 GO:0005509
Lal3g0283 470 SMART efh_1 336 364 IPR002048 GO:0005509
Lal3g0283 470 SMART efh_1 365 389 IPR002048 GO:0005509
Lal3g0283 470 SMART serkin_6 86 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0283 470 MobiDBLite consensus disorder prediction 1 31 - -
Lal3g0283 470 Pfam EF hand 337 362 IPR002048 GO:0005509
Lal3g0283 470 ProSitePatterns EF-hand calcium-binding domain. 345 357 IPR018247 -
Lal3g0283 470 Gene3D Transferase(Phosphotransferase) domain 1 173 272 - -
Lal3g0283 470 PANTHER SERINE/THREONINE-PROTEIN KINASE 278 446 - -
Lal3g0283 470 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0283 Lal-Chr3 1847168 1852443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0283 39 451 EF-hand Containing Proteins AT4G04720 58.691 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal3g0283 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0283 K13412 - gmx:100812843 594.734