Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0282 ATGAGTAACAAAAATCATGCAACTGATGCAAACATTGGCAACAATGGCCAGAAAGTCCAAGGAGTGAGAGGTGAGAAACAAAAGGTAGAGTTCTCTGAATATGAGGAGAATATTATTGCCAAGATGTTTAGATTGGTTGGAGAGAGATGGTCTCTTATTGCTGGAAGAATTCCTGGAAGAACTGCAGAAGAGATTGAAAAGTATTGGACTACAAAGTTTGGTTCACCAAGTGACCAATGTTCATCTACTGATGATTAA 258 0.3837 MSNKNHATDANIGNNGQKVQGVRGEKQKVEFSEYEENIIAKMFRLVGERWSLIAGRIPGRTAEEIEKYWTTKFGSPSDQCSSTDD 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0282 85 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 77 IPR017930 -
Lal3g0282 85 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 3 77 - -
Lal3g0282 85 MobiDBLite consensus disorder prediction 1 25 - -
Lal3g0282 85 SMART sant 27 75 IPR001005 -
Lal3g0282 85 MobiDBLite consensus disorder prediction 1 21 - -
Lal3g0282 85 Gene3D - 30 73 - -
Lal3g0282 85 CDD SANT 30 71 IPR001005 -
Lal3g0282 85 SUPERFAMILY Homeodomain-like 30 72 IPR009057 -
Lal3g0282 85 ProSiteProfiles Myb-like domain profile. 23 73 IPR001005 -
Lal3g0282 85 PANTHER AND CPC, PUTATIVE-RELATED 3 77 - -
Lal3g0282 85 Pfam Myb-like DNA-binding domain 29 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0282 Lal-Chr3 1837946 1838807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0282 31 73 MYB Transcription Factor Family AT5G14750 48.837 9.69e-13 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal3g0282 Myb_DNA-binding 9.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0282 - - adu:107482590 103.99