Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0269 ATGCCTATTACCTTCTTCCCTTTCTCTAAGTTCCTTTCATTCTCCTTCATCTTCTCACTTTTTCTCTCTCTTTCAATCTCCAACACTGACCCTGCTGATGTTCAAGCTCTCGGGGTCTTGTACAACGCGATGAATAGTCCAACTGTTCTAACTGGTTGGAAAATCGGTGATGGTGATCCGTGTGGAGAGTCATGGAAAGGGATAACCTGTGATGGTTCATCAGTTGTTTCCATTGAGCTCTCAGGTTTAGGACTCAATGGGACTCTTGGATACTTGCTTTCAGACCTTATGTCACTGAGAAAACTTGACTTAAGTGACAACAAGATCCATGACACAATTCCTTACCAGTTGCCGCCGAATCTTACTAGCTTGAATTTTGCAAGAAATAACTTAAGTGGAAATCTTCCTTATTCAATTTCTGCCATGACTTCACTCAATTATCTGAATGTCAGCAATAATGTGCTCTCCATGACAATTGGCGACATGTTTCAAACTCTTTCTTATCTTAGTACCCTGGATCTATCCTTCAATAGTTTTTCTGGAGATCTTCCTCCTTCATTTGCTTCATTGTCCAATCTTTCTTCTCTCGTTTTGCAGAACAATCAGTTGACTGGCTCTCTTGTTGCTCTTGTTGGTTTGCCATTGGATACTTTAAATGTTGCTAACAATAATTTCAGTGGATGGATACCCCATGAGCTTAGTTCCATCCCTAATTTCATATATGATGGAAACTCTTTTGCTAATGGTCCTGCTCCTCCTTCACCACCATCTAAATCGCCTCCACCAAGTGGATCTCATAATAGTCATCATCATTCTGGATCTGGTTCACATAATAAAACACGGAATTCTGATAATAATGGAAACTCTGATAGCCATAAGGGTTTGACAACGGGGGCCATTGTAGGCATTGTTTTTGGTTCAGTGTTGGCTGCTCTTCTTGTGGTACTTGCTTTTGTTTTCTGTATCCAAAAGCAAAAAAAGAAGGAAAAGGGTGCAAGTACTTCTAGTGGGAGGCTTCCTCGTGGAATTACTAATGTAACTCCTCAGATGCAGGAGCAAAGGGTAAAGAGTGCTGCTGTTGTTACAGATCTCAAACCTCCTCCTGCCGAAAGTGTGATGATTGAGAGGGTACCTACAAAGAGTGGATCTGTAAGGCAAATGAAGTCCCCTATAACTTCCACATCTTACACAGTTGCTTCTCTCCAAAGCGCAACAAATAGCTTTAGTCAAGAGTTTATTGTCGGTGAAGGTTCTCTTGGTCGAGTTTACAAGGCTGATTTCCCAAATGGAAAGATCATGGCTATTAAGAAGATTGATAACTCAGCACTGTCACTACAGGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCACGCTTGCGGCATCCCAACATCGTTACACTGGCTGGATATTGTGCGGAGCATGGCCAACGACTTCTAGTTTATGAGTATATCGAGAATGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGTAAGGATTTATCTTGGAATGCCCGTGTACGCATAGCACTTGGCACAGCCCGAGCTTTAGAGTATTTGCATGAAGTGTGCTTGCCATCTGTTGTTCATAGAAATTTCAAATCAGCAAATATACTACTTGATGAAGAGCTCAATCCTCACTTGTCTGACTGTGGTTTAGCTGCTCTAACTCCAAACACTGAGCGGCAGGTTTCAACTCAGATGGTCGGTTCATTTGGTTATAGTGCTCCCGAGTTTGCATTATCTGGGGTATACACAGTAAAAAGCGATGTTTACAGCTTTGGGGTGGTTATGCTGGAACTACTGACTGGTCGAAAGCCACTTGACAGTTCACGGGCTAGATCAGAGCAATCACTTGTGAGGTGGGCAACACCACAGCTCCATGATATAGATGCTTTGGCCAAAATGGTTGATCCTGCTCTGAATGGCATGTATCCGGCAAAGTCACTTTCACGCTTTGCCGATATCATTGCCCTGTGTGTTCAGCCGGAACCCGAATTTCGACCTCCCATGTCTGAGGTGGTGCAAGCGTTGGTACGATTAGTCCAAAGAGCAAGTGTGGTTAAACGGCGACCAAGTGAGGAATCTGGTTTTGGTCACAAGACACCAGATCATGAGGCCATAGACATGTCGTTTTAA 2151 0.4291 MPITFFPFSKFLSFSFIFSLFLSLSISNTDPADVQALGVLYNAMNSPTVLTGWKIGDGDPCGESWKGITCDGSSVVSIELSGLGLNGTLGYLLSDLMSLRKLDLSDNKIHDTIPYQLPPNLTSLNFARNNLSGNLPYSISAMTSLNYLNVSNNVLSMTIGDMFQTLSYLSTLDLSFNSFSGDLPPSFASLSNLSSLVLQNNQLTGSLVALVGLPLDTLNVANNNFSGWIPHELSSIPNFIYDGNSFANGPAPPSPPSKSPPPSGSHNSHHHSGSGSHNKTRNSDNNGNSDSHKGLTTGAIVGIVFGSVLAALLVVLAFVFCIQKQKKKEKGASTSSGRLPRGITNVTPQMQEQRVKSAAVVTDLKPPPAESVMIERVPTKSGSVRQMKSPITSTSYTVASLQSATNSFSQEFIVGEGSLGRVYKADFPNGKIMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIENGNLHDMLHFAEDSSKDLSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSEESGFGHKTPDHEAIDMSF 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0269 716 Pfam Protein kinase domain 411 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0269 716 MobiDBLite consensus disorder prediction 247 291 - -
Lal3g0269 716 Gene3D Transferase(Phosphotransferase) domain 1 486 702 - -
Lal3g0269 716 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Lal3g0269 716 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Lal3g0269 716 MobiDBLite consensus disorder prediction 696 716 - -
Lal3g0269 716 Gene3D Ribonuclease Inhibitor 30 285 IPR032675 -
Lal3g0269 716 PANTHER OS01G0253100 PROTEIN 27 712 IPR045271 GO:0004714|GO:0006468
Lal3g0269 716 ProSiteProfiles Protein kinase domain profile. 408 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0269 716 CDD STKc_IRAK 414 685 - -
Lal3g0269 716 SUPERFAMILY Protein kinase-like (PK-like) 383 682 IPR011009 -
Lal3g0269 716 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 27 712 - -
Lal3g0269 716 SUPERFAMILY L domain-like 43 238 - -
Lal3g0269 716 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515
Lal3g0269 716 Gene3D Phosphorylase Kinase; domain 1 371 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0269 Lal-Chr3 1770173 1775977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0269 142 716 Strubbelig Receptor Gene Family AT4G22130 70.761 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lal3g0269 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0269 - - gmx:100781455 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0269 3 1770173 1775977 Lal11g0417 11 3128563 3134795 LSH