Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0256 ATGGGAAAATCAGGGGGTAGAAGAAAAAAGGGTAGTGCTTCAAATCAAGCTTCTGTTGATAACTCAGCAGCCCCAATTGCTAATGGTGGTGTGGAATTGGATTCCTCAATATTTTTGAAGAGAGCCCATGAGCTCAAAGAAGAGGGGAATAGTAGATTCCAGAATAAAGACTATGTTGGTGCCCTACAACAGTATGAGAATGCCCTTAAACTAACCCCTAAGACCCACCCGGATAGGGCTGTTTTCCACAGCAACAGAGCTGCTTGTTTGATGCAAATGAAACCTATCGATTATGAGACTGTGATTGCTGAGTGCACCATGGCGCTTCAGGTCCAGCCCCAATTTGTTAGGGCACTCCTCCGGAGGGCTCGGGCATTTGAGGCTGTAGGAAAGTATGAAATGGCTATGCTTGATGTGCAGGTGTTGCTGGGAGTTGAACCAAATCACGGGGATGCTTTGGAGATTGCTCGGAGATTGAGGACCACACTGGGAAATTGGCAGGAAGCCCAGAAGGACATCCATAGTCGCCCTTCCCCTGCTGCCCTTGGCGCTTCTGCTGTACGTGGTGCTCCTATTGCTGGTTTAGGACCGTCTTTACCTGCCCGACCAGGACCTAAGAAGGGGGCAAGTGCAGCAGTCGGATCGGTTGTGTCACCTAATTACAAGCCGGAGAAGCCCCAAGTGGTTTTATCTGCAGAAAATGATCGCGAGAACAAGTCTCAATTGCCAAAACTTGCGTTGAAACCCTCAAATGGCTATGCTAATTCTTCTAATCCTAGAAAGGGAAACCAGAAGGAACAGCTGTCTCACTCAGCAACTGTACGTGGACAACATTCGGAGGTTGTAATTCGTTGGAGACCATTGAAGCTTGTTTATGATCATGACATCAGGCTTGCTGAGATGCCAGTGAAATGCAGTTTTAGAGTACTGAGAGAATTAGTCAGCAAAAGGTTTCCATCATCGAAGTCAGTTCTGATCAAGTATAAGGATAATGATGGTGATTTGGTCACCATTACCTCTACTGATGAACTCAGATTAGCAGAGTCTAGTGTGGATAGCCATCTCCTGAAAGAGCCCGAAGCAGATAAAAGTGATTCAGTTGGGATGCTAAGACTAAATATTGTTGAAGTTAGTTCTGAGCAAGAGCCACCTTTATTGGAAGAGGAGGAGGAAAAACCTGTTGTGAGCGAAGGGGTTAAGGCAGATGAAAATGTGTCTCATTCAGCCAGTGAATCTGCCTCTGAAGCTCCTGATGCTGAGGCTGATAAGATAGAGAAAGATGCGCCAAAGGAAAAACCAGATGCTACAGAAGATGGCAAGGAAGTGGAGATGGATGATTGGTTGTTTGAATTTGCTCAGCTTTTCCGCTCACATGTTGGTATTGATCCAGATGCTCATATTGATTTGCACGAGCTTGGGATGGAGTTTTGTTCAGAGGCACTTGAGGAAACAGTAACTGGTGAGGAGGCTCAGTATCTCTTTGACAAAGCTGCTTCAAAGTTCCAGGAGGTGGCTGCTTTGGCATTCTTCAATTGGGGCAATGTTTACATGTGTGCTGCTAGGAAGCGTATCCCCTTGGAAGAATCAGCTGAGGAGGAGGTAGTGTCAGAACGGCTTCAAATTGCGTATGTCTGGGTCAAGGAAAAATATTCCTTGGCACGAGAAAAGTATGAGCAAGCACTTGTGGTTAAACCAGACTTCTATGAAGGGTTGTTGGCTATGGGGCAGCAACAATTTGAAATGGCTAAGCTTCATTGGTCTTTTGCACTTGCTAAGAAGATAGATCTATCAGGCTGGGATTCTACAGAGACAATTCAACTTTTTGACACAGCAGAGGAAAAGATGAAAGCCGCAACTGATATCTGGGAGAAGCTGGAGGAGCAAAGAGCAATGGAGCTACAGGACCCGAATACAGGGAAGAAAGAACTATTGAGAAGAAGTAAAAAACACGGAAGTTCAGCTGAAGGTGAGTCCTCTACTGTTCGTCAGGGTGATATATCCGCAAAAGAAGCTGCAGAGCAAGCAGCCGTCATGAGATCACAGATTCACCTTTTCTGGGGTAATATGCTATTTGAACGATCTCAAGTTGAATGTAAATTAGGAAAGGGCGATTGGAAAAAAAATCTAGATGCTGCAATCGAGCGCTTTAAGCTTGCCGGAGCGTCTGAGGGTGATGTTTCACTGGTGCTAAAGAATCATTGCTCCAATGGAGATGAAAAGGAAGGAGAAGTAAAAGGATCGAAAAGTCACAACCCAATTACACCGGCAAAATAG 2274 0.4543 MGKSGGRRKKGSASNQASVDNSAAPIANGGVELDSSIFLKRAHELKEEGNSRFQNKDYVGALQQYENALKLTPKTHPDRAVFHSNRAACLMQMKPIDYETVIAECTMALQVQPQFVRALLRRARAFEAVGKYEMAMLDVQVLLGVEPNHGDALEIARRLRTTLGNWQEAQKDIHSRPSPAALGASAVRGAPIAGLGPSLPARPGPKKGASAAVGSVVSPNYKPEKPQVVLSAENDRENKSQLPKLALKPSNGYANSSNPRKGNQKEQLSHSATVRGQHSEVVIRWRPLKLVYDHDIRLAEMPVKCSFRVLRELVSKRFPSSKSVLIKYKDNDGDLVTITSTDELRLAESSVDSHLLKEPEADKSDSVGMLRLNIVEVSSEQEPPLLEEEEEKPVVSEGVKADENVSHSASESASEAPDAEADKIEKDAPKEKPDATEDGKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMEFCSEALEETVTGEEAQYLFDKAASKFQEVAALAFFNWGNVYMCAARKRIPLEESAEEEVVSERLQIAYVWVKEKYSLAREKYEQALVVKPDFYEGLLAMGQQQFEMAKLHWSFALAKKIDLSGWDSTETIQLFDTAEEKMKAATDIWEKLEEQRAMELQDPNTGKKELLRRSKKHGSSAEGESSTVRQGDISAKEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGKGDWKKNLDAAIERFKLAGASEGDVSLVLKNHCSNGDEKEGEVKGSKSHNPITPAK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0256 757 Coils Coil 608 628 - -
Lal3g0256 757 SMART PB1_new 285 377 IPR000270 GO:0005515
Lal3g0256 757 MobiDBLite consensus disorder prediction 1 25 - -
Lal3g0256 757 MobiDBLite consensus disorder prediction 9 23 - -
Lal3g0256 757 ProSiteProfiles TPR repeat profile. 42 75 IPR019734 GO:0005515
Lal3g0256 757 MobiDBLite consensus disorder prediction 416 439 - -
Lal3g0256 757 MobiDBLite consensus disorder prediction 195 219 - -
Lal3g0256 757 Pfam PB1 domain 285 375 IPR000270 GO:0005515
Lal3g0256 757 MobiDBLite consensus disorder prediction 629 655 - -
Lal3g0256 757 MobiDBLite consensus disorder prediction 250 273 - -
Lal3g0256 757 MobiDBLite consensus disorder prediction 232 273 - -
Lal3g0256 757 SUPERFAMILY CAD & PB1 domains 282 352 - -
Lal3g0256 757 SMART tpr_5 80 115 IPR019734 GO:0005515
Lal3g0256 757 SMART tpr_5 42 75 IPR019734 GO:0005515
Lal3g0256 757 SMART tpr_5 116 149 IPR019734 GO:0005515
Lal3g0256 757 SMART tpr_5 535 567 IPR019734 GO:0005515
Lal3g0256 757 MobiDBLite consensus disorder prediction 629 667 - -
Lal3g0256 757 SUPERFAMILY TPR-like 488 584 IPR011990 GO:0005515
Lal3g0256 757 Gene3D - 287 357 - -
Lal3g0256 757 MobiDBLite consensus disorder prediction 380 441 - -
Lal3g0256 757 PANTHER PROTEIN CLMP1 1 749 IPR044517 -
Lal3g0256 757 SUPERFAMILY TPR-like 39 173 IPR011990 GO:0005515
Lal3g0256 757 ProSiteProfiles PB1 domain profile. 285 377 IPR000270 GO:0005515
Lal3g0256 757 MobiDBLite consensus disorder prediction 735 757 - -
Lal3g0256 757 CDD PB1 288 357 - -
Lal3g0256 757 Gene3D Tetratricopeptide repeat domain 39 180 IPR011990 GO:0005515
Lal3g0256 757 PANTHER - 1 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0256 Lal-Chr3 1672161 1674434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0256 39 175 Calmodulin-binding Proteins AT3G25230 26.351 4.54e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0256 - - gmx:100786963 1072.38