Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0252 ATGGTGGGTTCATGTTTCAATGGGCTTCGTATGAAGTGGTCAAAGAGTAATAAACCTCTACCAGCACCTTCTACTTCTTACAAGACAAAGTTGAAATGTGAAATGGAGAACAATAGCATGGAAAGGAAGAGGTTTGATAGTTTGGAATCATGGTCCATGATATTAGACTCTGAGAATGTGGAAACATGGGAGCCTTCAAAAGAGGACACAGAGGAATGGAGTGCAGATCTTTCACAACTTTTCATAGGTAATAAATTTGCTTCTGGAGCTCATAGTAGGATATACCGTGGAATTTACAAGCAGAGAGCAGTTGCTGTGAAAATGGTGAAGATTCCAACACAGGATGAAGAGAGAGGGGTGTTATTAGAGCAGCAATTTAATTCTGAAGTGTCTTTGCTTTCACGCCTCTTTCATGATAACATAGTGCAGTTTATTGCAGCATGTAAAAAACCGCCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAACATTAAGGATGTACCTGAACAAGAAAGAGCCATACTCTCTTGCAATAGACACAATACTAAGGTTAGCTCTTGACATATCAAGGGGTATGGAGTACCTTCATTCACAAGGTATCATTCACAGAGACCTCAAGTCTAATAACTTGCTTCTCAATGATGAGATGAGGGTTAAGGTTGCAGATTTTGGTACATCATGTCTTGAAACTCGATGCCGTGAGACCAAAGGTAACATGGGAACATATCGTTGGATGGCGCCGGAGATGATCAAGGAAAAACCTTATGCAAGGAAAGTTGATGTGTATAGTTTTGGTATTGTTCTTTGGGAGCTCACAACTTGTTTACTTCCTTTCCAAGGAATGACACCAGTCCAAGCTGCTTTTGCTGTGGCTGAGAAGAACGAAAGGCCTTCACTATCAGCAAGTTGTGAACCAGCACTTGCACATTTGATAAAGCGTTGCTGGTCATCAAACCCTTCTAAGAGGCCAGATTTTTGTGAAGTTGTGTCTATTCTTGAGAAATATGATGAGTGTGTGAAAGAGGGTCTACCTTTAACTCATCATTCTGGCTTAGTAAGTGGCAATTCCATTATTCAACTCCTAAAAGGTTGTGTCTCCATACCTATACATTCCTGA 1122 0.4046 MVGSCFNGLRMKWSKSNKPLPAPSTSYKTKLKCEMENNSMERKRFDSLESWSMILDSENVETWEPSKEDTEEWSADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVKIPTQDEERGVLLEQQFNSEVSLLSRLFHDNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLAIDTILRLALDISRGMEYLHSQGIIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYARKVDVYSFGIVLWELTTCLLPFQGMTPVQAAFAVAEKNERPSLSASCEPALAHLIKRCWSSNPSKRPDFCEVVSILEKYDECVKEGLPLTHHSGLVSGNSIIQLLKGCVSIPIHS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0252 373 Pfam Protein tyrosine and serine/threonine kinase 82 334 IPR001245 GO:0004672|GO:0006468
Lal3g0252 373 SUPERFAMILY Protein kinase-like (PK-like) 56 334 IPR011009 -
Lal3g0252 373 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 10 363 - -
Lal3g0252 373 PRINTS Tyrosine kinase catalytic domain signature 158 171 IPR001245 GO:0004672|GO:0006468
Lal3g0252 373 PRINTS Tyrosine kinase catalytic domain signature 196 214 IPR001245 GO:0004672|GO:0006468
Lal3g0252 373 PRINTS Tyrosine kinase catalytic domain signature 242 252 IPR001245 GO:0004672|GO:0006468
Lal3g0252 373 PRINTS Tyrosine kinase catalytic domain signature 261 283 IPR001245 GO:0004672|GO:0006468
Lal3g0252 373 PRINTS Tyrosine kinase catalytic domain signature 305 327 IPR001245 GO:0004672|GO:0006468
Lal3g0252 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lal3g0252 373 SMART serkin_6 80 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0252 373 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 363 - -
Lal3g0252 373 Gene3D Phosphorylase Kinase; domain 1 69 162 - -
Lal3g0252 373 ProSiteProfiles Protein kinase domain profile. 80 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0252 373 CDD STKc_MAP3K-like 87 334 - -
Lal3g0252 373 Gene3D Transferase(Phosphotransferase) domain 1 163 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0252 Lal-Chr3 1642690 1646549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0252 1 368 MAP Kinase Kinase Kinase AT1G62400 79.045 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lal3g0252 PK_Tyr_Ser-Thr 1.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0252 - - gmx:100803225 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1506 5 17570452 17575066 Lal3g0252 3 1642690 1646549 LSH