Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0220 ATGAGTGAACAATTGGGACTGCTTAAAGTCACAGTTGTGCAAGGGAAGAGGTTGGTGATCAGGGATTTCAAGAGCAGTGATCCTTATGTTGTGCTCAAAGTAGGAAATCAGACAGCAAAGACCAAAGTCATTAATAGCTGTTTGAATCCTGTTTGGAATGAGGAGCTGAATTTCACACCAACAGAACCCTTATTAGTTCTGAATTTGGAAGTATTTGATAAAGATCTTTTGAAGGCTGATGATAAGATGGGAAATGCTTTCCTAAACCTTCAACCATTAGTTTCAGCAGCTAGATTAAGGGATATTTTAAGAGTCTCCTCTGGCGAGACTACATTAAGGAAGGTCATTCCTGAAAGTGACAATTGTCTTGTCCGCGAAAGCAGCATCAATTGTGTTAATGATGAAGTTGTGCAGAATGTTTGGTTAAGGCTCCGCGGAGTCGAGTCCGGGGAGGTAGAATTGATAGTCAAGCTCATCACACCTGTTGCTCCCTCAAAGTAG 501 0.4152 MSEQLGLLKVTVVQGKRLVIRDFKSSDPYVVLKVGNQTAKTKVINSCLNPVWNEELNFTPTEPLLVLNLEVFDKDLLKADDKMGNAFLNLQPLVSAARLRDILRVSSGETTLRKVIPESDNCLVRESSINCVNDEVVQNVWLRLRGVESGEVELIVKLITPVAPSK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0220 166 Pfam C2 domain 6 99 IPR000008 -
Lal3g0220 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lal3g0220 166 PRINTS C2 domain signature 22 34 IPR000008 -
Lal3g0220 166 PRINTS C2 domain signature 46 59 IPR000008 -
Lal3g0220 166 PRINTS C2 domain signature 67 75 IPR000008 -
Lal3g0220 166 CDD C2_ArfGAP 5 150 - -
Lal3g0220 166 SMART C2_3c 7 102 IPR000008 -
Lal3g0220 166 Gene3D C2 domain 3 163 IPR035892 -
Lal3g0220 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 162 IPR044562 -
Lal3g0220 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 158 IPR035892 -
Lal3g0220 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0220 Lal-Chr3 1460423 1463137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0220 1 154 C2H2 Transcription Factor Family AT4G21160 44.156 5.81e-36 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0220 3 1460423 1463137 Lal11g0361 11 2657630 2661579 LSH