Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0197 ATGGCTAACCTAACCACTACCGAGTCAGTGTGCGTGACAGGAGCCAACGGGTTCATTGGGTCATGGCTGGTTCAAACCCTCTTACAAAACCCACGCTACACCATCCACGCCACCATCTTCCCCGGCACCTCCTCCTCCCACCTCTTCACCCTCCACCCCCACGCCATTTCACGTCTCACCCTCTTCCACGCCGACATCACCGACTCCGACGCCCTCTCCACCGCCATCCAAGGCTGCTCCGGCGTCTTCCACGTCGCTTCTCCATGCACCCTCGAAGACCCCACCGACCCACACAACGATCTCATCCTCCCCGCCGTACAAGGCACCCTCAACGTCCTACAAGCCGCGAAACGCTTCAACGTCAAGCGCGTGGTTCTCACCTCCTCCATATCCGCCATGGTTCCCAACCCTGCCTGGCCGGAGAACACGCCGTTGGACGAGTCCTCATGGACGGACGTTGAGTACTGCGAGTCACGAGGGAAATGGTACCCAGTATCGAAGACTGCGGCGGAGAAGGCGGCGTGGGAGTTTAAACGTGATCACGGTGGTGCTGACGTGGTGGCAATTCTGCCGGCGACGTGTATTGGGTCATTGTTGCAGCCGGAACTGAATGCAAGTAGCGCGGTGTTGCAGAGGTTAATGATGGGGTCGAAGGAGACACAAGAATATCATTGGTTGGGTGCAGTGCATGTGAAAGATGTTGCTAAAGCTCAGATTTTGTTATATGAGACTTCAACTGCTTCTGGTAGATATCTTTGTACCAATGGTATTTATCAATTTTCCACTTTTGCAACCATTGTCTCTCAGTTATATCCTCATTTCCCTATTCACAGGTTCCCTGAGGAAACTCAACCTGGGCTCACTCCATGCAAAGATGCAGCCAAGAGGCTAATAGATTTGGGACTTGTGTTCACTCCGGTTCAAGATGCTGTTAGAGAAGCAGTGGAGAGCCTTGCGGCTAAAGCCTTCCTTCACCAAACACCTGCTAGGAATTAG 996 0.5361 MANLTTTESVCVTGANGFIGSWLVQTLLQNPRYTIHATIFPGTSSSHLFTLHPHAISRLTLFHADITDSDALSTAIQGCSGVFHVASPCTLEDPTDPHNDLILPAVQGTLNVLQAAKRFNVKRVVLTSSISAMVPNPAWPENTPLDESSWTDVEYCESRGKWYPVSKTAAEKAAWEFKRDHGGADVVAILPATCIGSLLQPELNASSAVLQRLMMGSKETQEYHWLGAVHVKDVAKAQILLYETSTASGRYLCTNGIYQFSTFATIVSQLYPHFPIHRFPEETQPGLTPCKDAAKRLIDLGLVFTPVQDAVREAVESLAAKAFLHQTPARN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0197 331 Gene3D - 2 331 - -
Lal3g0197 331 CDD FR_SDR_e 10 302 - -
Lal3g0197 331 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 317 IPR036291 -
Lal3g0197 331 Pfam NAD dependent epimerase/dehydratase family 10 244 IPR001509 -
Lal3g0197 331 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 314 - -
Lal3g0197 331 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 8 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0197 Lal-Chr3 1323907 1324974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0197 8 324 Monolignol Biosynthesis Gene Families AT2G02400 64.984 4.98e-161 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0197 - - gmx:100795399 513.842