Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0193 ATGGAAAGTGGTGAGAGAAGAAAGAAAGGAATAGAGGAAAGATCAGAAGATGTTATTCTTCAACCACAATGGCGCCGACAAAACCCAACAATCCTTTCTTCTTCTTCTTCTTCTTCAGAGCTGTCTCTTCAACCCGAATGGAGAAGGCGAGGATCCAATTCAAGGAACCAAACTTATACTACAATTCTTAATCCCCACCTTCTCAATTCTAATTCTTCATTCCAATACGATTCTGCACTTCCCAACATAGAAGCATTACACATATCGAAGCAATTACCTACTTCATTTCCCACCCCCGAAAAGAAGGGCAAAGTCTCACCCATTCCAAGACCTGATAATGGTGGCACTTCATCAATTCTAACTACCAAACTTCGTGTCAATCATTTCCCTCTTAACTTCAACCCAGACACTACAATCATGCATTATAATATTGCTGTTAAACCCATCTCTTCCTCTAACCATAACCGTCCTAAACAATTATCCAAGTCCGATTTCATCATTATCAGAGAAAATTTGTTTTCTCGTGATCCTCACAGATTACCATTGGAAATGACTGCACATGATGGTGCCAAAAATATCTATAGTGCTGTAACTTTGCCACAAGAAACTTTTACTGTGTACATTTCTGAAGGAGAGGATGAAAAGAGTGGTTTTTACAATGTTACTATAACACTTGTTAATACACTCAAGTTTCGCAAGTTAATCGATTATCTTAGCGGCTATACTCTTTCAATCCCTAGAGATATTTTACAAGGGATGGATGTGGTGATGAAGGAGAATCCAGCTAGGCGTGCAGTTTCGATGGGACGGCATTTCTATCCCATGGATCCTCCTTTGGTGATGAAGGATCTTCACCATGGTATAATTGCTGTTGGGGGGTTTCATCATAGTTTAAAGCCTACATCACAGGGTTTGTCCTTGTGTGTAGATTACTCGGTGTTGGCATTCCGAAAGCGAATGTCGGTTTTGAACTTCTTGTATGAACATATTGATGGCTTTAACTTGAATGAATTTGATTGCTTTAGGAAACGTGTTGAGGAGGCACTTATTGGATTGAAGGTTAATGTGACTCATCGGAAATCCAACCGGAAATATGTTATTGGGAGATTAACACCTGTGAATACAAGGTATGTCACTTTCCCCAATGACAATGCCAAGGGATGGATTGTCGCAAAGGATGTTAGCATTCTTAGCTTTTTTAGAGACAAATATGGCAAGGATATTGTACACAAAGATATTCCTTGTTTAGATTTAGGGAAAGGCAGGAAGAAGAACTATGTACCTATGGAATTCTGTATTTTAGTTGATGATCAAAGATATCCGAAGGAGCGTTTGGATGGGTTTGCTGGGAAAACATTGAAAGCTATGTCACTAGCTCACCCAAATGAGAGGGAGAGTGCCATACAGAAGATGGTGCAGTCAAGTGATGGTCCTTGCGGTGGCGGTGTTATTCAAAATTTTGGAATGAGTGTCAGCATGAACATGACATCCGTTGTGGGACGTGTCATTGGCCCCCCAGAATTGAAGCTAGGTGATCCAAATGGCAAGATTATCAAGATAACAGTGGATATGGAGAAATGCAACTGGAACCTTGTTGGAAGATCAATGGTGGAAGGCAAACCAGTTGAGCGTTGGGGCATTCTTGATTTCACCAGTTTTGGGTCTTATAGACACAAATTGAAAGTCAATGAATTCGTTCAAAATATTATTGGCAAATACAAAAAGTTGGGTATAGACATGCGAGAGCCCATTTGGTATGAAGAATCTTCAATGCAGATACTTGCAAGCAATGATTTGCTATCTGACTTACTTCAAAAAATCAACAACATTTGTAAATACAACCAAGGTCCCCTGCAATTTCTTCTCTGTGTAATGAGTAAAAGAAGTCCAGGTTACAAGTACCTCAAGTGGATTTCTGAGACCAAAGTTGGTATAGTGACACAATGTTGCTTGTCTAATAGTGCTAATGAAGGGGATGACCTATTTTTTACTAATCTGTCTCTTAAGATCAATGCCAAGCTTGGAGGCAGTAATGTGGAGCTTAGTAATCGGCTCCCTTACTTTGAGGGTGAAGGACATGTTATGTTTGTCGGAGCTGATGTCAATCACCCTGGTTCTCGGGACACCAGGAGTCCATCAATTGTCGCGGTGGTTGCAACTGTTAATTGGCCAGCTGCAAATCGTTATGCAGCACGTGTTTGCCCTCAGTACAATCGGTGTGAGAAAATATTGAACTTCGGGCAGATTTGCCTTGAGCTTGTTGCATGTTATAGGAGGAAAAATGGAGTTAGGCCAGAAAAAATAGTTGTTTTTCGTGATGGAGTCAGTGAATATGAGTTTGATATGGTTCTTAATGAAGAGCTACTAGATCTGAAGACAGCATTCGAAAGGTCAAATTACTACCCAACCATCACTGTTATTGTAGCACAAAAGCGACATCAAACACGATTCTTTCCAGAGGGTTGGAGGGATGGGTCTTCCACTGGCAATATTTTACCTGGAACAGTTGTGGACACAAAAGTTACACACCCTTTTGAGTTTGACTTTTACCTTTGTAGTTACTATGGAAGCCTAGGCACAAGCAAGCCCACTCACTACCATGTCCTATGGGATGAGCACAAGTTTACATCTGATGAATTGCAGAAGCTCATATATGAGATGTGCTTCACCTTTGCAAGGTGCACTAAACCTGTATCTTTAGTACCTCCAGTATACTATGCCGACCTTGCTGCTTATAGAGGACGCTTATACCATGAAGCAAGGAATGGGACTCTGAAATCAGCAGCATCTTCATCTTCTAAAGGTTCTTCATCGGTTTCATCAATTGCTTCATTTGAACAGGGATTTTATAGGCTGCATGCTGACCTGGAAAATATAATGTTCTTCATCTAA 2892 0.4059 MESGERRKKGIEERSEDVILQPQWRRQNPTILSSSSSSSELSLQPEWRRRGSNSRNQTYTTILNPHLLNSNSSFQYDSALPNIEALHISKQLPTSFPTPEKKGKVSPIPRPDNGGTSSILTTKLRVNHFPLNFNPDTTIMHYNIAVKPISSSNHNRPKQLSKSDFIIIRENLFSRDPHRLPLEMTAHDGAKNIYSAVTLPQETFTVYISEGEDEKSGFYNVTITLVNTLKFRKLIDYLSGYTLSIPRDILQGMDVVMKENPARRAVSMGRHFYPMDPPLVMKDLHHGIIAVGGFHHSLKPTSQGLSLCVDYSVLAFRKRMSVLNFLYEHIDGFNLNEFDCFRKRVEEALIGLKVNVTHRKSNRKYVIGRLTPVNTRYVTFPNDNAKGWIVAKDVSILSFFRDKYGKDIVHKDIPCLDLGKGRKKNYVPMEFCILVDDQRYPKERLDGFAGKTLKAMSLAHPNERESAIQKMVQSSDGPCGGGVIQNFGMSVSMNMTSVVGRVIGPPELKLGDPNGKIIKITVDMEKCNWNLVGRSMVEGKPVERWGILDFTSFGSYRHKLKVNEFVQNIIGKYKKLGIDMREPIWYEESSMQILASNDLLSDLLQKINNICKYNQGPLQFLLCVMSKRSPGYKYLKWISETKVGIVTQCCLSNSANEGDDLFFTNLSLKINAKLGGSNVELSNRLPYFEGEGHVMFVGADVNHPGSRDTRSPSIVAVVATVNWPAANRYAARVCPQYNRCEKILNFGQICLELVACYRRKNGVRPEKIVVFRDGVSEYEFDMVLNEELLDLKTAFERSNYYPTITVIVAQKRHQTRFFPEGWRDGSSTGNILPGTVVDTKVTHPFEFDFYLCSYYGSLGTSKPTHYHVLWDEHKFTSDELQKLIYEMCFTFARCTKPVSLVPPVYYADLAAYRGRLYHEARNGTLKSAASSSSKGSSSVSSIASFEQGFYRLHADLENIMFFI 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0193 963 MobiDBLite consensus disorder prediction 21 55 - -
Lal3g0193 963 MobiDBLite consensus disorder prediction 1 20 - -
Lal3g0193 963 CDD Piwi_ago-like 483 917 IPR045246 -
Lal3g0193 963 Gene3D paz domain 314 440 - -
Lal3g0193 963 Pfam Piwi domain 621 915 IPR003165 GO:0003676
Lal3g0193 963 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 64 962 - -
Lal3g0193 963 Pfam PAZ domain 340 445 IPR003100 GO:0005515
Lal3g0193 963 SUPERFAMILY PAZ domain 315 474 IPR036085 GO:0005515
Lal3g0193 963 ProSiteProfiles Piwi domain profile. 620 919 IPR003165 GO:0003676
Lal3g0193 963 MobiDBLite consensus disorder prediction 91 119 - -
Lal3g0193 963 Pfam N-terminal domain of argonaute 122 257 IPR032474 -
Lal3g0193 963 ProSiteProfiles PAZ domain profile. 342 436 IPR003100 GO:0005515
Lal3g0193 963 SMART PAZ_2_a_3 324 454 IPR003100 GO:0005515
Lal3g0193 963 MobiDBLite consensus disorder prediction 1 55 - -
Lal3g0193 963 CDD PAZ_argonaute_like 320 435 - -
Lal3g0193 963 Gene3D - 690 963 IPR036397 GO:0003676
Lal3g0193 963 Pfam Argonaute linker 1 domain 268 318 IPR014811 -
Lal3g0193 963 SUPERFAMILY Ribonuclease H-like 603 919 IPR012337 -
Lal3g0193 963 SMART DUF1785_2 266 319 IPR014811 -
Lal3g0193 963 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 64 962 - -
Lal3g0193 963 Gene3D - 502 683 - -
Lal3g0193 963 SMART Piwi_a_2 620 918 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0193 Lal-Chr3 1292807 1300969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0193 105 962 Eukaryotic Initiation Factors Gene Family AT1G48410 34.783 2.99e-141 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0193 K11593 - gmx:100783571 1429.08