Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0174 ATGAAGCTCTTTAGCCTTTTAGTGTTATCCTTACCTTTCTTCTCAGTTATGGGGCAGCTACATTCCAAGGACATATTAGCATTGCTGGAATTTAAGAAATGCATCAAGCATGACCCTACAGGTTATGTCCTCAATTCTTGGAATGAGGAATCCAATGACTTTGATGGATGCCCATCTTCATGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCTTGGGTTGTCCTTGATAACCTAGGTCTCTCTGCCGAAGCTGATTTGAGTGTTTTTTCTAACCTCACAAAGCTTGTGAAACTCTCCATGCCCAACAATTCCATATCAGGAAAATTACCTGACAACATTGGTGATTTCAAAAGCCTTCAGTTCATGGATATTTCCAATAACCTCTTTTCTTCTTCCTTACCTTCGGGAATTGGTAACTTAGGTAGCTTGCAGAATCTGTCATTGGCTGGAAACAACTTCTCTGGCCTAATTCCTGAAACCATTTCGAGAATGGTTTCTATCCAGTCTTTGGACTTGAGCCGCAACTCCTTTTCTGGAGCACTGCCAGCATCATTGACTAAGCTGAAAAGCCTGGTATCTCTTAACTTGTCTCATAACAGATTCACTGGAAATATTCCCAAAGGTTTTGAGCTGATGTATGCTCTTGAAAAACTTGACTTGCATGGGAATATGATCGATGGTCATTTAGATTCTGAGTTTATTTTTTTATCAAGTGCCAGCTATGTTGATTTCAGTGACAATGGGCTTGATAGTTCTGATTCCCAAAGGCAGAAATTTCTACCACGAATATCTGAAAGTATTAAGCATCTGAATCTAAGCCACAACCTTCTCACCGGGACATTGGTTAGTGGAGCCGAGCAACTAGTTTTTGAAAATTTGAAGGTGTTAGACCTCAGCTACAATAAACTGGATGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTTCAGGTCCTTAAGCTTAGCAATAACAGATTTTCAGGATTTATTCCGAACGGCCTACTAAAAGGAGATTCTTTGGTTTTAACTGAACTGGATTTGAGTGCCAACAATCTCTCAGGGCCACTAAGTATAATTACATCAACAACTCTGCATTTTCTTAATCTCTCATCAAATGGATTCACTGGTGAACTGCCACTGCTGACTGGAAGCTGTGCTGTACTTGATCTTTCAAACAACAAATTTGAAGGAAATTTTACCAGGATAGTGAAATGGGGGAACATAGAATATCTCGATCTCAGTGTAAATCATTTAACAGGGAGCATCCCTGAAGTAACTCCTCAATTTTTGAGATTGAATTATTTGAATCTATCACATAATTCTCTTAGCAGCTCCCTCCCAAGAGTCTTAACACAGTATCCAAAGCTTAAAGTGCTTGACATTAGTTCCAACCAGTTAGATGGACTATTTCTAGCTGATCTGCTTGCAATGCCTACTTTGCAAGAGCTCCACCTGGAAAATAATATGATCTCTGGCAGCATTAATTTATCATCTACTGGTCTTTCTGATCTGCAGATTCTTGATCTTTCTCACAACCGGTTTAATGGCTATTTTCCTGATCAGTTTGGGTCAATAACTGGCATGAAAGTTCTCAATATTGCTGGAAATAATTTTTCTGGTTCTCTTCCAACCGCCATTTCTGATATGATTTCTCTAGAATCCTTGGATATATCAGAGAATGACTTCACTGGTCATCTACCAAATAACATGCCGAAGGGGCTCAATAACTTTAACGTTTCTCAAAATGATCTGTCTGGAGTTGTCCCAGAAGATCTTAGAAAGTTCCCTAGCTCTTCTTTCTTTCCAGGGAATGCTAAATTACATTTTCCAAATGGTCCTCTTGGATCAACCACTTCACCACCTGAAAGTTCCAAGAGGAAGCCTATGAACACTATGATTAAGGTAATAATTATTGTATCATGTGTGATTGCTCTCTTCATATTAATCCTGCTTGCTATCTTCATACACTACATACGTATATCAAGATCCTCACCAGAATATGATACGAGTAAGGATATCCACTGGCGTACTGAACCAATCATCTCTGGCCCTGTCCCCGTTCGTACATCAGAAAGGGGTGGTGCTTTGGTTGTATTAGCTGAGGACCTCATGACATCACGTAAAGGATCGCCATCAAAGGCAATCAGCCCCGATGAAAAAATGGCAGCTGTAACTGGTATCTCCCCATCTAAAGCCAGCCACTTTTCGTGGTCACCAGAGTCCGGTGATTCATTTGCTGCTGAAAATCTTTCAAGGCTAGACACAAGATCCCCGGATAGGTTGATTGGAGAGCTGCATTTTCTTGATGATACAATAGCATTGACACCTGAGGAGCTGTCAAGGGCTCCAGCTGAAGTTTTGGGAAGAAGCAGTCATGGTACTTCTTACAAAGCAACTCTGGACAGTGGTTTATTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTAGCGAAACAGAGAAAAGAATTTGTTAAAGAGATTAAGAAATTTGCAAACATTAGGCATCCTAATGTTGTGGGATTAAGAGGATACTATTGGGGTCCTACACAGCACGAGAAGCTTATTCTTTCAGATTACATCTCACCAGGAAGTCTTGCAAGTTTTCTTTACGATCGACCAGGAAGAAAAGGTCCACCGTTAACTTGGGCTCAGAGGCTCAAAATAGCAGTTGATGTAGCGCGTGGCCTGAACTATCTCCATTTTGACCGTGCTGTTCCTCACGGGAACCTCAAAGCTACTAACGTGTTACTAGATACAGTTGATATGAATGCACGTATTGTTGATTACTGTCTTCATCGACTTATGACTCAGGCTGGTACTATTGAACAGATTAATGATGCAGGGGTGTTGGGTTATCGTGCACCAGAGTTAGCTGCTTCGAAGAAGCCAATGCCCTCCTTCAAATCAGATGTTTATGCTTTCGGAGTGATACTTTTGGAACTTTTAAGTGGAAGGTGCGGCGGTGATGTGATATTTGGTGATGATGGAGGTGTTGATCTGACAGAGTGGATAAGGTTGCGGGTAGCAGAAGGTCGAGGCTCAGAATGTTTTGATGCTACATTGATGCCGGAAATTAGTAATACTGCTGTAGAAAAGGGAATGAAGGAGGTCGTAGGTATAGCCACTCGATGCATTCGATCTGTTTCTGAAAGGCCGGGAATCAAGACGATATATGAAGATCTTTCTTCTATATAG 3195 0.41 MKLFSLLVLSLPFFSVMGQLHSKDILALLEFKKCIKHDPTGYVLNSWNEESNDFDGCPSSWNGVLCNGGNVAWVVLDNLGLSAEADLSVFSNLTKLVKLSMPNNSISGKLPDNIGDFKSLQFMDISNNLFSSSLPSGIGNLGSLQNLSLAGNNFSGLIPETISRMVSIQSLDLSRNSFSGALPASLTKLKSLVSLNLSHNRFTGNIPKGFELMYALEKLDLHGNMIDGHLDSEFIFLSSASYVDFSDNGLDSSDSQRQKFLPRISESIKHLNLSHNLLTGTLVSGAEQLVFENLKVLDLSYNKLDGELPGFDFVYDLQVLKLSNNRFSGFIPNGLLKGDSLVLTELDLSANNLSGPLSIITSTTLHFLNLSSNGFTGELPLLTGSCAVLDLSNNKFEGNFTRIVKWGNIEYLDLSVNHLTGSIPEVTPQFLRLNYLNLSHNSLSSSLPRVLTQYPKLKVLDISSNQLDGLFLADLLAMPTLQELHLENNMISGSINLSSTGLSDLQILDLSHNRFNGYFPDQFGSITGMKVLNIAGNNFSGSLPTAISDMISLESLDISENDFTGHLPNNMPKGLNNFNVSQNDLSGVVPEDLRKFPSSSFFPGNAKLHFPNGPLGSTTSPPESSKRKPMNTMIKVIIIVSCVIALFILILLAIFIHYIRISRSSPEYDTSKDIHWRTEPIISGPVPVRTSERGGALVVLAEDLMTSRKGSPSKAISPDEKMAAVTGISPSKASHFSWSPESGDSFAAENLSRLDTRSPDRLIGELHFLDDTIALTPEELSRAPAEVLGRSSHGTSYKATLDSGLLLRVKWLREGVAKQRKEFVKEIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTVDMNARIVDYCLHRLMTQAGTIEQINDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLSGRCGGDVIFGDDGGVDLTEWIRLRVAEGRGSECFDATLMPEISNTAVEKGMKEVVGIATRCIRSVSERPGIKTIYEDLSSI 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0174 1064 SUPERFAMILY L domain-like 388 598 - -
Lal3g0174 1064 Pfam Leucine Rich repeat 293 307 IPR001611 GO:0005515
Lal3g0174 1064 Pfam Leucine rich repeat 505 563 IPR001611 GO:0005515
Lal3g0174 1064 Pfam Leucine rich repeat 143 202 IPR001611 GO:0005515
Lal3g0174 1064 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Lal3g0174 1064 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Lal3g0174 1064 Gene3D Ribonuclease Inhibitor 260 617 IPR032675 -
Lal3g0174 1064 PANTHER OS07G0626500 PROTEIN 6 1064 - -
Lal3g0174 1064 Gene3D Transferase(Phosphotransferase) domain 1 861 1064 - -
Lal3g0174 1064 Gene3D Ribonuclease Inhibitor 172 259 IPR032675 -
Lal3g0174 1064 PRINTS Leucine-rich repeat signature 457 470 - -
Lal3g0174 1064 PRINTS Leucine-rich repeat signature 502 515 - -
Lal3g0174 1064 PANTHER - 6 1064 - -
Lal3g0174 1064 ProSiteProfiles Protein kinase domain profile. 782 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0174 1064 SUPERFAMILY Protein kinase-like (PK-like) 785 1061 IPR011009 -
Lal3g0174 1064 SUPERFAMILY L domain-like 45 380 - -
Lal3g0174 1064 Gene3D Phosphorylase Kinase; domain 1 775 859 - -
Lal3g0174 1064 SMART LRR_typ_2 430 453 IPR003591 -
Lal3g0174 1064 SMART LRR_typ_2 141 164 IPR003591 -
Lal3g0174 1064 SMART LRR_typ_2 213 238 IPR003591 -
Lal3g0174 1064 SMART LRR_typ_2 165 188 IPR003591 -
Lal3g0174 1064 SMART LRR_typ_2 189 212 IPR003591 -
Lal3g0174 1064 SMART LRR_typ_2 502 525 IPR003591 -
Lal3g0174 1064 SMART LRR_typ_2 314 338 IPR003591 -
Lal3g0174 1064 SMART LRR_typ_2 117 140 IPR003591 -
Lal3g0174 1064 SMART LRR_typ_2 550 574 IPR003591 -
Lal3g0174 1064 SMART LRR_typ_2 291 313 IPR003591 -
Lal3g0174 1064 Gene3D Ribonuclease Inhibitor 21 171 IPR032675 -
Lal3g0174 1064 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Lal3g0174 1064 Pfam Protein tyrosine and serine/threonine kinase 786 983 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0174 Lal-Chr3 1160836 1166028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0174 3 1012 Receptor kinase-like Gene Family AT4G36180 28.409 5.88e-86 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal3g0174 PK_Tyr_Ser-Thr 2.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0174 - - gmx:100793639 1739.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0174 3 1160836 1166028 Lal3g0174 3 1160836 1166028 ECH
Lal5g1597 5 18444811 18450147 Lal3g0174 3 1160836 1166028 LSH
Lal3g0174 3 1160836 1166028 Lal11g0316 11 2280034 2285402 LSH