Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0159 ATGGCAATAGAGATGGGTCCAATTAGTGTGTTTGTGAGCATTGCTGCTTCTCTTATGCTTGTAAGATATCTTCTCAAGAATCTAAATTGGTGGTTGTATGAGTCCAAATTGGGTGCAAAGCAGTATTCTTTGCCCCCTGGTGACTTCGGTTGGCCCTTAATTGGTAACATGTGGTCCTTTCTGAGGGCTTTTAAGTCCACCAACCCTAACTCCTTTGCAGACTCCTATATAGCCAGGTATGGAAAGACAGGAATATATAAGGTATTGATGTTTGGAAATCCAAGTGTAATAGTGACAACAGCAGAAGGATGCAAGAAAGTATTAACAGATGATGATAAATTCACACCTGGTTGGCCTGTCGCCACTGCAGAACTAATGGGAAAGAAATCATTTGTTTCAATCCCTTATGAAGATCATAAACGCCTTAGGCGTTTAACATCTGCTTCAGTCAATGGTTATGAAGCATTGTCTATTTACATACCTTTCATTGAAGAAAATGTCAAAGCTTCATTGGAAAATTGGACCAAGATGGGTGAAATTGAGTTCTTAACTGAGATGAGAAAGCTTACTTTCAAAATCATTATGCATATTTTCTTTGGTGCAACTAGTGCAACTATAAGGGAAGGTTTGGAAAAGGAATACACAGCACTTAATCATGGTATTAGAGCCATGAGAATTAATATTCCTGGTTTTGCTTTCCATAGAGCACTCCAGGCTAGGAAGAATCTAGTGTCTATATTTCAATCTGTTGTGGATCAAAGAAGAATTGAAAGGAAAGGAAGAGCACCAGGGACAGGCAAAAAACACAAAGATATGATGGATGCTCTGATGGATGCTGTAGATGAAAATGGAAAATCATTGGGTGATGATGATATCATAGATATCATGTTGATGTACTTGAATGCAGGTCATGAATCTTCAGGACATATTACAATGTGGGCAGCCTATTACCTCAATAAACATCCTGAATATCTCCAAAAAGCTAGGGAAGAACAAGAAGAAATATTGAAGAAAAGGCCTCCAACACAGAAAGGATTGATACTAGAGGAAGTTAGAAAGATGGAGTTTCTTTCTAAGGTGGTTGATGAAACACTTCGTTTGGTTACTTTCTCACCTATGGTCTTTAGAGAGGCAAAATCTGATGTCAACATTAATGGTTACCTCATTCCAAAGGGTTGGAAAGTTATGACTTGGTTCAGGCATGTTCACCATGATAATGATATATATCCTAATCCAATGGAGTTCAATCCTTATAGATGGAATATACCACACAAGGCTGGAGAATTTCTTCCATTTGGAGCTGGAACTAGATTGTGTCCAGGAAATGATCTTGCCAAGATTGAAATCTCTGTTTTTCTTCATTACTTTGTGATGAATTACAAGCTTGAACCTTCGAATCCAAATTGTCCTATCAGACACTTACCCCATACAAGGCCCACGGACAATTGCTTGGCAAGGATCAAGAAAATCTCTGCTTGA 1479 0.3847 MAIEMGPISVFVSIAASLMLVRYLLKNLNWWLYESKLGAKQYSLPPGDFGWPLIGNMWSFLRAFKSTNPNSFADSYIARYGKTGIYKVLMFGNPSVIVTTAEGCKKVLTDDDKFTPGWPVATAELMGKKSFVSIPYEDHKRLRRLTSASVNGYEALSIYIPFIEENVKASLENWTKMGEIEFLTEMRKLTFKIIMHIFFGATSATIREGLEKEYTALNHGIRAMRINIPGFAFHRALQARKNLVSIFQSVVDQRRIERKGRAPGTGKKHKDMMDALMDAVDENGKSLGDDDIIDIMLMYLNAGHESSGHITMWAAYYLNKHPEYLQKAREEQEEILKKRPPTQKGLILEEVRKMEFLSKVVDETLRLVTFSPMVFREAKSDVNINGYLIPKGWKVMTWFRHVHHDNDIYPNPMEFNPYRWNIPHKAGEFLPFGAGTRLCPGNDLAKIEISVFLHYFVMNYKLEPSNPNCPIRHLPHTRPTDNCLARIKKISA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0159 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Lal3g0159 492 Gene3D Cytochrome P450 34 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PANTHER CYTOCHROME P450 26 16 489 - -
Lal3g0159 492 SUPERFAMILY Cytochrome P450 40 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 Pfam Cytochrome P450 45 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0159 492 PANTHER ENT-KAURENOIC ACID OXIDASE 2 16 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0159 Lal-Chr3 1057803 1061051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0159 21 487 Cytochrome P450 AT1G05160 63.404 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0159 K04123 - gmx:100781238 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1622 5 18631224 18635025 Lal3g0159 3 1057803 1061051 LSH
Lal3g0159 3 1057803 1061051 Lal11g0301 11 2150026 2155984 LSH