Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0130 ATGCTTCGCCCCATTTCCTATAACAATTGGCTATGCTATCTTCTTCTTCTTCTTCTTCTTCTTCTTTATCTTTATCTTTCTTCAATGAATGGAAGTGTATACGATGTGTTTATAAGTTTTCGAGGTATAGATACACGTTCAGGTTTCACAGGAAACCTTCATAGAGCTCTATGTGGGAAACAAATAAAAAGCTTCATGGATGATAAAGATCTTGAGAAAGGAGCAGAAATAAATCCAGCTCTTCATAAGGCAATCCAGAACTCTAGGATTGCGCTTGTAGTTCTTTCTAAGAACTATGCATCTTCAACTTTTTGTTTGGATGAACTTGAGAAGATTATGGATTGTTCAAAAGATAAGGGCATGTTGGTTTTGCCTGTTTTTTATGAAGTTGACCCTTCTGATGTTCGCTATCAGAAAGGAGAATATGCAGATGCACTAAACAAACATGAAGCCAGAATCATTGATAATAAGGACAAAATTGAAAAGTGGAGGTTTGCTTTGACAAAAATAGCTCATCTCTCTGGTTGGGAGTTCAACCGTGACAGGTACGAATATGAGTTGATTGATAGTATTGTTGAAGACATCATAAGAAAGATTGATAGATTGAGTGATGGTGAAAAGGAGAAAATAATTTGTAATGTGGATGACAAGCATGTTACACAAGATGATAATGTAGAATACTTGGTCACATATCCAACTCCAAAAAAGGCTTTGGTTGAACAATTTAACGACATGAGTATAGCTGGAATTCTTAACTATGACAGTAGGAAAATGATGGCAGCTGCTGCTCTGATTCAGCATAGATTCCGTACGTGGAGATTCCGTAGAGAACTTACCCACAAGCGATGTCAGGCCATTAAAATTCAAGCTGCCTTCAGGGGATATCAAGTGCGGAAGCAAAATCATAAAATAATTTGGTCCGTTGGAGTGCTCGAGAAAGCAATCCTGCGATGGCGCCTAAAGAGAAGAGGCTTATGTGGCTTCAAGGTTAACCATGTTCAAGAAATTAAAGATGTCAAGCATGGAAATGAAACAGAGGAGGAATTCTTCAGGGCGGGTAGGAAACAAGCCGAAGAACGTGTGGAGAGGTATGTAGCTTGTGTAAAGGCCATGTTCAGTTCTAAGAAAGCACAAGAAGAGTATAGGAGGATGAAGTTGGCCCATTCTCAAGCAAAGCTTGAACTTGAAGAGATCCTCAATTCTGAAGCTGACAAATTAACAAAAGATGCTACCCAAAACAAGGTTAAGCGTTGGGAAGGGCAGGGACAGGGTTTATTTGTTTGTAGAGAAGAAAACAATGAGACCCTACTTTTGCATCACATTACTTCTGATGATATCTATACGAAACAAGAAGATACAGTTATATCATGGAGAGATCCAGAATATGCTACAGAACTGGCACTTAGATTTCAAGACCCTAGTGAATGCTCTTACATATGGGAACATATTTGCAGTGTACAAAGGAATATATAG 1473 0.3849 MLRPISYNNWLCYLLLLLLLLLYLYLSSMNGSVYDVFISFRGIDTRSGFTGNLHRALCGKQIKSFMDDKDLEKGAEINPALHKAIQNSRIALVVLSKNYASSTFCLDELEKIMDCSKDKGMLVLPVFYEVDPSDVRYQKGEYADALNKHEARIIDNKDKIEKWRFALTKIAHLSGWEFNRDRYEYELIDSIVEDIIRKIDRLSDGEKEKIICNVDDKHVTQDDNVEYLVTYPTPKKALVEQFNDMSIAGILNYDSRKMMAAAALIQHRFRTWRFRRELTHKRCQAIKIQAAFRGYQVRKQNHKIIWSVGVLEKAILRWRLKRRGLCGFKVNHVQEIKDVKHGNETEEEFFRAGRKQAEERVERYVACVKAMFSSKKAQEEYRRMKLAHSQAKLELEEILNSEADKLTKDATQNKVKRWEGQGQGLFVCREENNETLLLHHITSDDIYTKQEDTVISWRDPEYATELALRFQDPSECSYIWEHICSVQRNI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0130 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 255 308 IPR027417 -
Lal3g0130 490 Gene3D - 398 490 IPR011993 -
Lal3g0130 490 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 252 400 - -
Lal3g0130 490 SMART till_3 33 173 IPR000157 GO:0007165
Lal3g0130 490 Gene3D - 29 204 IPR035897 -
Lal3g0130 490 SUPERFAMILY PH domain-like 412 487 - -
Lal3g0130 490 SUPERFAMILY Toll/Interleukin receptor TIR domain 29 176 IPR035897 -
Lal3g0130 490 Coils Coil 374 394 - -
Lal3g0130 490 Pfam IQ calmodulin-binding motif 285 300 IPR000048 GO:0005515
Lal3g0130 490 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 252 400 - -
Lal3g0130 490 ProSiteProfiles TIR domain profile. 32 199 IPR000157 GO:0007165
Lal3g0130 490 Pfam TIR domain 34 199 IPR000157 GO:0007165
Lal3g0130 490 Gene3D - 255 304 - -
Lal3g0130 490 ProSiteProfiles IQ motif profile. 281 305 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0130 Lal-Chr3 810854 818219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0130 253 398 CAMTA Transcription Factor Family AT3G16940 54.362 2.55e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0130 - K21596 lang:109345548 764.992