Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0123 ATGGAAGGTTCTAATGCCCAAGCCCAACAACCAAGAATTGCAGAAGTGGAGAGATTGAACGTTGAGCAACCACTGAAGAGGTGTTTGGAGTGCGGAACTAGTAGTACCCCTCTTTGGAGAAGGGGTGAAGCCGGGATAAATACACTTTGTAACGCTTGTGGTCTAAGATTCAAGAGCAGATCAAAAGCTTCGGATCCAAACAAGATCAACAACGATGTCATCAAGAAGGGAAAAAGGAGGACTAAGATTGGCAATAGGGTTAGCTTGGAGAAGAAATTGAATGGTTTGGCTAACCAGTTTTTCAGTCATAGACCAGTGAAGGAGAGGCGTTGGACGAGGCTTACCGAAGAGGAACAAGTTGCGGTGCTTCTAATGTCTTTAAATGCTTAA 390 0.4436 MEGSNAQAQQPRIAEVERLNVEQPLKRCLECGTSSTPLWRRGEAGINTLCNACGLRFKSRSKASDPNKINNDVIKKGKRRTKIGNRVSLEKKLNGLANQFFSHRPVKERRWTRLTEEEQVAVLLMSLNA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0123 129 SMART GATA_3 22 74 IPR000679 GO:0006355|GO:0043565
Lal3g0123 129 CDD ZnF_GATA 27 80 IPR000679 GO:0006355|GO:0043565
Lal3g0123 129 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 26 71 - -
Lal3g0123 129 Pfam GATA zinc finger 28 61 IPR000679 GO:0006355|GO:0043565
Lal3g0123 129 ProSiteProfiles GATA-type zinc finger domain profile. 22 58 IPR000679 GO:0006355|GO:0043565
Lal3g0123 129 ProSitePatterns GATA-type zinc finger domain. 28 53 IPR000679 GO:0006355|GO:0043565
Lal3g0123 129 Gene3D - 20 83 IPR013088 GO:0006355|GO:0008270
Lal3g0123 129 PANTHER OS01G0976800 PROTEIN 15 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0123 Lal-Chr3 778172 778780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0123 26 128 C2C2-Gata Transcription Factor Family AT3G06740 42.308 2.34e-18 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lal3g0123 GATA 5.3e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0123 - - lang:109345561 197.593