Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0101 ATGAAAAAGATTCCAAAGAGGAGCTGCAAGTCAGCATCACACAGGCTCTATAAGGACAAGGCGAAGAATCACGTTGATGATCTGCAAGTGATGTTCCTGGATTTACAGTTTGCCAGGAAGGAGAGCCGCACGGTAGATGTTGCACTCCTTGAGGAGCAAGTCCATCAGATGCTTCGGGAGTGGAAGGCTGAGCTCAATGAGCCTTCTCCCGCTTCTTCTTTACAGCAAGGTGATAGTCTTGGGTCATTCTCGACCGATGTCTGTAGGTTATTACAGCTGTGTGAGGAGGAAGATGATGCTACTAGTCTATTAGCTACTCCTAAGTCTGAGCCTTATGACCAGACTCTGCAGGCCGGTGCTGAGGTGCTGTTACAAGAGGGCCAACATCACCATGATTACCCATTGATTGATGAGTCCAAACACTCCACCTTTGGAGTTCACAATCCGGCAGCTAACAGCTTGAATGGGGCTGCTTTAGAGTATCATCAATTTGATTTAAATCAGGATTTCAATCATGGGTTTTATGCTGGTTTTTCCGGTACAGCTTTTGGTGAGGAAGTTGCTGTTCCTTGTATATCTAGCTTTCTACCAAGTATCTGTCCTCCTCCTTCTGCTTTCTTAGGTCCAAAATGTGCACTCTGGGATTGTCCAAGGCCTGTTCAAGTGTTGGACTGGTGCCAAGACTATTGTAGTAGCTTTCATGCTACTCTTGCTTTGAATGAAGGACCACCAGGCATGGCCCCAGTTTTACGACCTGGGGGAATTGGACTGAAGGATAATTTACTTTTTGTTGCCCTTACTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAGTGCGAGGGAGCAGCGACTTCAAAGTCTCCGTGGAATGCACCTGAACTTTTTGATCTGTGTGTTCTTGAGGGTGAGAGTATTAGGGAGTGGCTTTTTTTCGATAAGCCTCGAAGGGCATTTGAGAGTGGCAACAGAAAGCAGAGGGCATTGCCAGATTATAGTGGGCGTGGTTGGCATGAATCTAGAAAGCAAGTGGTGAATGAGTTTGGAGGGCTGAAAAGATCTTACTATATGGATCCACAACCACTTAACCATTTTGAGTGGCACCTTTATGAGTATGAAATTAGCAAGTGTGATGCATGCGCCTTATATCGGTTAGAACTAAAGCTTGTTGATGGGAAGAAGAGCTCCAAGGCAAAGGTAGCAAGTGATTCTGTTGCTGATCTACAGAAGCAGATGGGAAGGCTCTATGCCAAAGGCAGAGCCAAACTTAATGCCAAGGTTGGCATTGGCGGTGTCTATTCAGCACAAAATGGATCATATGAGCATGGGTTAGCTGCACCATATGACTATCTTGTTGAGAACACAGGTGAATATTATGTGACATGA 1386 0.4567 MKKIPKRSCKSASHRLYKDKAKNHVDDLQVMFLDLQFARKESRTVDVALLEEQVHQMLREWKAELNEPSPASSLQQGDSLGSFSTDVCRLLQLCEEEDDATSLLATPKSEPYDQTLQAGAEVLLQEGQHHHDYPLIDESKHSTFGVHNPAANSLNGAALEYHQFDLNQDFNHGFYAGFSGTAFGEEVAVPCISSFLPSICPPPSAFLGPKCALWDCPRPVQVLDWCQDYCSSFHATLALNEGPPGMAPVLRPGGIGLKDNLLFVALTAKAQGKDVGIPECEGAATSKSPWNAPELFDLCVLEGESIREWLFFDKPRRAFESGNRKQRALPDYSGRGWHESRKQVVNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKSSKAKVASDSVADLQKQMGRLYAKGRAKLNAKVGIGGVYSAQNGSYEHGLAAPYDYLVENTGEYYVT 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0101 461 PANTHER TRANSCRIPTION FACTOR VOZ1 1 461 IPR039277 GO:0006355|GO:0048578
Lal3g0101 461 PANTHER TRANSCRIPTION FACTOR VOZ1 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0101 Lal-Chr3 626742 635036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0101 3 460 VOZ-9 Transcription Factor Family AT1G28520 66.872 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Lal3g0101 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0101 - - pvu:PHAVU_003G073700g 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0101 3 626742 635036 Lal3g0101 3 626742 635036 ECH