Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0089 ATGGTTGGATCATTCGAAATCGGAGCCGTACCTTTCAACCCCGATGGGTGGGGCCCACCTGACGCCGCCATCGAGGGTTCCAACACCACCAACCTCCCTCACAACGTCCCCTTTGCTCCCTTCACCCGCTCCGACAAGGTAGGCCGTATCGCCGATTGGACCCGAAACTTCAACAACCCCGCGCGATCCAAAAACCCATCCGACGCCGTTTTCGACTTCACCAACGACGACTCCTTCCCTGCTTCCGCCGACGATGACGCCACATTCCGCCTCGTTGACGGCAAACCACCACCGCGCCCCAAATTCGGTCCTAAATGGCGTTTCCAGCAACAAAAACAACTCCCTCAACGCAAGGACGAAGAAGTCGAAGCCAAAAGACGCGAAGCTGAAAAAGAAAGAGCTCGCCGCGATCGTCTCTACCATCTCAATCGCTCAAACCCTCACGGTCCACGCCGTGAAGCTGCCGTTTACAAATCCTCAGTCGATATTCAACCAGAATGGAATATGCGCGATCAGATCCCCTTCTCTACGTTCTCTAAGCTTTCTTTCACTGTTCCAGAACCTGAAGACCTTCAATTCTGCGGTGGCCTCGAGTATTATGACCGAACCTACGATCGCACTACGCCGAAAAGTGATCGCAGATTGGAGCGTTTCAAGAACAGAAACTTTTTCAAGGTTACCACTACCGACGATCCTGTTATTCGAAGGCTCGCCAATGAGGATAAGGCGACTGTTTTCGCCACTGATAGTATCCTGTCCACGCTTATGTGCGCGCCCAGGTCTGTTTACTCTTGGGATATTGTTGTTCAGCGTGTTGGGAATAAGTTGTTCTTTGACAAGCGTGACGGTTCACAATTGGATTTGCTTTCGGTTCATGAGACATCTCAGGAGCCTTTGCCTGAGGCCAAGGATGATATTAATTCTGCGCATTCGTTGAGTGTTGAGGCTGCTTATATAAACCAGAATTTCTCGCAGCAGGTTTTGATTAGGGATGGGAACAAGGTGACCTTTGATGAGGCTAACCCTTTTGCTAATGAGGGTGAAGAGGTTGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGTTGGATAAAGAGATATATCTTGTTGCGAGATGTGAGGTGCAGAGTGTGCTTGATGTGAATCAGCAGAGGTCTTACCTTACTTTGAATGCTTTGAATGAGTTTGATCCGAAGTATTCTGGTGTGGATTGGAGGCAAAAGTTGGAGACTCAAAGGGGTGCTGTGTTGGCTACTGAGCTGAAGAACAATGCAAATAAGTTGGCTAAATGGACTGCTCAGGCACTGTTGGCTAGCGCTGATATGATGAAGTTGGGATATGTGTCTCGAATTCATCCCCGTGATCATTTTAATCATGCGATTTTGGCTGTTGTTGGATATAAGCCGAAGGACTTCGCAGCACAGATTAATTTGAACCCAAATAATATGTGGGGAATTGTGAAGTCAATTGTGGACATGTGCATGAAGCTTGAAGAGGGGAAATATGTTCTTGTGAAGGATCCATCTAAGCCACAGGTTAGGATTTATCAGGTTCCAGCAGATGCATTTGAGAATGACTATGTGGAGGAGCCACTTCCGGAAGAGGAACAAGCTCAACCTCCAGCAGAGGGCGTTGATGGTGAAGAGGCAACTGCTACCACAAATGATGTGAATGATATCAAGATAGATAACCAAGCTTGA 1698 0.4817 MVGSFEIGAVPFNPDGWGPPDAAIEGSNTTNLPHNVPFAPFTRSDKVGRIADWTRNFNNPARSKNPSDAVFDFTNDDSFPASADDDATFRLVDGKPPPRPKFGPKWRFQQQKQLPQRKDEEVEAKRREAEKERARRDRLYHLNRSNPHGPRREAAVYKSSVDIQPEWNMRDQIPFSTFSKLSFTVPEPEDLQFCGGLEYYDRTYDRTTPKSDRRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDSILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLDKEIYLVARCEVQSVLDVNQQRSYLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHAILAVVGYKPKDFAAQINLNPNNMWGIVKSIVDMCMKLEEGKYVLVKDPSKPQVRIYQVPADAFENDYVEEPLPEEEQAQPPAEGVDGEEATATTNDVNDIKIDNQA 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0089 565 MobiDBLite consensus disorder prediction 82 135 - -
Lal3g0089 565 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 516 IPR007783 GO:0003743|GO:0005737|GO:0005852
Lal3g0089 565 MobiDBLite consensus disorder prediction 550 565 - -
Lal3g0089 565 PIRSF Transl_init_eIF3d 1 546 IPR007783 GO:0003743|GO:0005737|GO:0005852
Lal3g0089 565 MobiDBLite consensus disorder prediction 527 565 - -
Lal3g0089 565 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 5 549 IPR007783 GO:0003743|GO:0005737|GO:0005852
Lal3g0089 565 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 5 549 - -
Lal3g0089 565 MobiDBLite consensus disorder prediction 112 135 - -
Lal3g0089 565 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 528 IPR007783 GO:0003743|GO:0005737|GO:0005852
Lal3g0089 565 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0089 Lal-Chr3 541571 544335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0089 4 563 Eukaryotic Initiation Factors Gene Family AT4G20980 76.027 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0089 K03251 - gmx:100799613 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0089 3 541571 544335 Lal11g0188 11 1320748 1324336 LSH