Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0066 ATGAAGGCTATAGTGATAACCACACCAGGAGGTCCTGAAGTATTGCAGCTCCAACAAGTGGAAGACCCTCAAATCAAAGACGATGAAGTTCTCATCAAAGTTGAAGCCACCGCTCTTAACCGCGCCGATACCCTTCAAAGGAAAGGTTCTTACCCTCCACCAAAAGGTGCCAGCCCATACCCTGGACTTGAGTGTTCTGGGACTATTCTATCCATCGGCAAAAACGTTTCCAGGTGGAAAATTGGCGACCAGGTGTGTGCTCTTCTATCCGGTGGAGGATATGCTGAGAAAGTTGCTGTTCCTGCTGGACAAGTTCTTCCAGTTCCTCCCGGGCTTTCTCTGAAGGATGCAGCTAGTTTTCCTGAGGTGGCATCCACTGTGTGGTCTACTGTTTTTATGACTAGCCGGCTATCTGCGGGAGAAACTCTGTTGTATTTTGCCACTGAATCTTGTAGTGCTTTTGTTATCCCTATTCATGGAGGTTCCAGTGGAATTGGTACATTTGCTATTCAGATAGCTAAGTACCGAGGTTCAAGAGTGTTTGTTACTGCAGGTAGTGAAGAGAAACTTGCTTTTTGCAAGGGTATTGGTGCTGATGTAGGCATCAATTACAAAACAGAGGACTTCGTTGCAAGAGTAAAAGAAGAAACTGGCGGTAAAGGTGTTGATGTTATTCTTGATTGTATGGGTGCATCCTACTATCAAAGAAATCTTGATAGCTTAAATTTTGATGGAAGGCTTTTTATTATCGGCTTTCAAGGTGGAGTTTCCACAGAATTTGATCTCCGTGCTTTATTCGGTAAACGTCTCACAGTACAAGCGGCTGGCTTGCGTAGCAGAAGCCCTGAAAATAAAGCTGTGATCGTTAGTGAAGTGGAGAAGAATGTTTGGCCTGCAATTGCAGAAGGAAAGGTTAAGCCTGTGGTCTACAAATCTTTCCCTTTTTCCGATGCGGCGGAGGCACACCGTCTTATGGAAAGCAGCCAGCATATTGGGAAGATATTGCTTTTCCCATGA 1017 0.4503 MKAIVITTPGGPEVLQLQQVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSIGKNVSRWKIGDQVCALLSGGGYAEKVAVPAGQVLPVPPGLSLKDAASFPEVASTVWSTVFMTSRLSAGETLLYFATESCSAFVIPIHGGSSGIGTFAIQIAKYRGSRVFVTAGSEEKLAFCKGIGADVGINYKTEDFVARVKEETGGKGVDVILDCMGASYYQRNLDSLNFDGRLFIIGFQGGVSTEFDLRALFGKRLTVQAAGLRSRSPENKAVIVSEVEKNVWPAIAEGKVKPVVYKSFPFSDAAEAHRLMESSQHIGKILLFP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0066 338 SMART PKS_ER_names_mod 10 336 IPR020843 GO:0016491
Lal3g0066 338 Gene3D - 120 275 - -
Lal3g0066 338 PANTHER QUINONE OXIDOREDUCTASE PIG3 1 337 - -
Lal3g0066 338 Pfam Alcohol dehydrogenase GroES-like domain 28 87 IPR013154 -
Lal3g0066 338 Pfam Zinc-binding dehydrogenase 164 279 IPR013149 -
Lal3g0066 338 PANTHER QUINONE OXIDOREDUCTASE PIG3-RELATED 1 337 - -
Lal3g0066 338 Gene3D - 12 336 - -
Lal3g0066 338 SUPERFAMILY GroES-like 1 139 IPR011032 -
Lal3g0066 338 CDD p53_inducible_oxidoreductase 1 336 IPR014189 -
Lal3g0066 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 111 301 IPR036291 -
Lal3g0066 338 TIGRFAM quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 336 IPR014189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0066 Lal-Chr3 394932 398625 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0066 - - gmx:100813682 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0066 3 394932 398625 Lal11g0152 11 996960 1002571 LSH