Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0057 ATGGTATTAGGCAACCACAGAAGTTTAGTATTTTTTTGGGTTGTACTTTTCTGCCTATGTTTAGAATTTGGTACTGCCATAGACACTATCACCCCATCTGAACTTGTCAAAGACCCTGAAACATTAAGCTCCAATAATGGTTTGTTCACTTTAGGATTTTTCAGTCCTAAAAATTCTACAAACCGCTATGTGGGAATCTGGTACCTCTCTGACTCCAATATCTTATGGGTAGCTAACAGAAACCAGCCACTAAAATTCAACTCTTCAGGTATTGTTACAATATCCAGGGATGGGAATCTTGTAGTATTGAACAGCGAGAACAACACTATTTGGTCATCATATGTGACTTATATTGCAAGCAATTCAACTGCACAACTTTCAGACACTGGAAATCTAGTGTTGCTAGATGGAAACACAGGAGAGGTTATGTGGGAAAGTTTCAAACATCCTACTAATGTTTATATACCAAATATGAAACTCAGTAGAAACAGAATAACAGGTGAAGAAGTATCATTTACATCATGGAAAAGCACTTCTGATCCATCTATTGGCTACTTTTCTTGTAGTCTTGAACGTCTCAGTGCTCCAGAGTTGTTTCTATGGGTTAATGGAACTCAGCCATATTATAGATCTGGTCCATGGAATGGTGAGATTTTTATTGGATTTCGCCCTCTAACAACTGGGTATCTAAAGGGATGTAATGTGAGTGATGAAGATGATGGAACTGTTTATTTTTCTTGTGATTCCACAGATCAATATGACTTCAGAACAGTGGCCTTGAGTCCAGAAGGCCTATTTGAAACTGCATCATGGAAAAACAAGAAAAAAATATCCAGTGATGTGTTCCATGGAACTAATTGCAATCAATATGGTGTATGTGGTGCATTTGGGAGCTGTGATTGGCAAACCTCACCAGTATGCAGCTGTTTGAGTGGCTATCAGCCCAAAAATCTAGAGGAGTGGAATAAAAAGAATTGGACTAGTGGGTGTGTGAGGAAGGTGCCACTACAATGTGGAAGTGGTGAAGTTAGAAGAGATGGTTTCTTGAAACTTGAGAAAATGAAAGTACCAGACTATTTACAAAAGTCAGCTTCTTTGGAAAATGAATGCACTGCACAGTGCTTACAGAATTGCTCTTGTGTGGCATATGCATATGACACTGGTATTGGATGCATGTCTTGGTTTGGGGACTTGATAGACACACAAAAATTCTCTGATGGAGGACTTGATCTTTACATTCGCATACCACCTTCAGAACTTGAAAAACATTCAGGTAAAAGAACAGTAATCATTGCAGTTGCAGTGAGTACTATAGGAGTTATTACATTAGCTATTTGTGCTTATCTCTCATGGAAATGGACTACTAAACCTACAGCTAGAAAAAGGAAGAGAGATGCAATATTTTGGTTCAATAGAGATGAATCAACAGCGGTAGATAGAAATGGCAAAAAAATTGGAGAACAGTCCGAAGTAGAACTCCACGAGCAATTGCTATTTGATACAGAAACACTTGCACTTGCGACTAATAACTTCGACTCGTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCAGTTTACAAGGGGAAGCTGAAAGATGGCAGGGAAATAGCCATTAAAAGGCTTTCTAAAGCATCCGGACAAGGACTAGAAGAATTCATGAATGAAGTAGTGGTGATTTCTAAGCTTCAACATCGCAATCTAGTAAGACTTCTTGGCTGTTGTAGAGAAGGAGAGGAAAAGATGTTGATCTACGAGTACATGCTGAATAAAAGTTTGGACACATTTATCTTTGGTCCACCCGAGCATAAACTCCTGGATTGGGGTAAACGCTTCAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGATTCTAGGCTGAGAATCATTCATAGAGATTTAAAAGCAAGTAATATCTTGCTGGATGAGGACTTGAATCCAAAAATATCAGACTTTGGATTAGCTAAAATATTTGGAGGGCGTGGAGATGAGGCTAATACTTCTAGGGTTGTTGGAACATATGGGTATATGGCACCTGAATATGCAATGGAAGGAATAGTTTCAGAGAAATCAGATGTCTTCAGTTTTGGAGTTTTGGTACTAGAGATCGTCAGCGGAAGGAAAAACACTAGCTTTTATAACAACGAGCAATTTCGAAGTCTAGTTTGGAAAGTATGGAATGAAGACAATATTGTATCTACAATAGATCAAAGCATATGTGAGCCTGTCAATGAGAAAGATATTGTGAGGTGTGTACATATAGGACTTTTGTGTGTGCAAGAAAGTGCAAGACACAGGCCTAATATGGCCACTGTGATTTCTATGCTTAACAGTGAAATTGTGAATCTTCCTTCACCAAGGCAACCTGCATACATAGAGAAGCCGGATATTTGTAATTCATTGTCTTCTGAAGAATGTCATCCATCACATTCAAACAACATTGTTAGTATTACAGATATCCAAGGCAGATGA 2481 0.3865 MVLGNHRSLVFFWVVLFCLCLEFGTAIDTITPSELVKDPETLSSNNGLFTLGFFSPKNSTNRYVGIWYLSDSNILWVANRNQPLKFNSSGIVTISRDGNLVVLNSENNTIWSSYVTYIASNSTAQLSDTGNLVLLDGNTGEVMWESFKHPTNVYIPNMKLSRNRITGEEVSFTSWKSTSDPSIGYFSCSLERLSAPELFLWVNGTQPYYRSGPWNGEIFIGFRPLTTGYLKGCNVSDEDDGTVYFSCDSTDQYDFRTVALSPEGLFETASWKNKKKISSDVFHGTNCNQYGVCGAFGSCDWQTSPVCSCLSGYQPKNLEEWNKKNWTSGCVRKVPLQCGSGEVRRDGFLKLEKMKVPDYLQKSASLENECTAQCLQNCSCVAYAYDTGIGCMSWFGDLIDTQKFSDGGLDLYIRIPPSELEKHSGKRTVIIAVAVSTIGVITLAICAYLSWKWTTKPTARKRKRDAIFWFNRDESTAVDRNGKKIGEQSEVELHEQLLFDTETLALATNNFDSSNKLGQGGFGPVYKGKLKDGREIAIKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCREGEEKMLIYEYMLNKSLDTFIFGPPEHKLLDWGKRFSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDLNPKISDFGLAKIFGGRGDEANTSRVVGTYGYMAPEYAMEGIVSEKSDVFSFGVLVLEIVSGRKNTSFYNNEQFRSLVWKVWNEDNIVSTIDQSICEPVNEKDIVRCVHIGLLCVQESARHRPNMATVISMLNSEIVNLPSPRQPAYIEKPDICNSLSSEECHPSHSNNIVSITDIQGR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0057 826 PIRSF SRK 2 826 IPR024171 GO:0004674
Lal3g0057 826 Gene3D Transferase(Phosphotransferase) domain 1 587 786 - -
Lal3g0057 826 CDD B_lectin 33 150 IPR001480 -
Lal3g0057 826 CDD STKc_IRAK 517 780 - -
Lal3g0057 826 SMART blect_4 33 150 IPR001480 -
Lal3g0057 826 SUPERFAMILY Protein kinase-like (PK-like) 497 808 IPR011009 -
Lal3g0057 826 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 825 - -
Lal3g0057 826 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
Lal3g0057 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 181 IPR036426 -
Lal3g0057 826 Pfam PAN-like domain 343 401 IPR003609 -
Lal3g0057 826 ProSiteProfiles PAN/Apple domain profile. 338 416 IPR003609 -
Lal3g0057 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Lal3g0057 826 Gene3D Phosphorylase Kinase; domain 1 473 586 - -
Lal3g0057 826 ProSiteProfiles Protein kinase domain profile. 511 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0057 826 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Lal3g0057 826 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 21 825 - -
Lal3g0057 826 SMART ntp_6 343 415 IPR003609 -
Lal3g0057 826 SMART serkin_6 511 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0057 826 CDD PAN_AP_plant 334 416 - -
Lal3g0057 826 Pfam D-mannose binding lectin 74 176 IPR001480 -
Lal3g0057 826 Pfam Protein tyrosine and serine/threonine kinase 514 779 IPR001245 GO:0004672|GO:0006468
Lal3g0057 826 Gene3D - 24 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0057 Lal-Chr3 344188 353212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0057 422 826 Receptor kinase-like Gene Family AT4G21410 50.602 1.23e-120 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal3g0057 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0057 - - gmx:106794168 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0057 3 344188 353212 Lal3g0057 3 344188 353212 ECH
Lal3g0057 3 344188 353212 Lal16g0640 16 4085610 4089929 PCT