Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0034 ATGGATACTCTCTGTTGCTTCACCTCTGTTACTCAGGTGGTTGGAGGGCGTTCTTCTTCTAGCTCTGGCAAGGGCAAGGGCCATCAGAGCACAGTCAAGTATGGCTTTAGCCTTGTTAAAGGGAAAGCAAATCATCCCATGGAGGACTATCATGTAGCCAAAATTTTCCAGATCAATGGCCAAGAGCTTGGACTTTTTGCTATATATGATGGACACTTAGGAGACAGTGTACCGGCTTATTTGCAAAAGCATCTCTTTTCTAATATCTTGAAGGAAGAGGACTTCTGGACTGATCCTAGCAGCTCTATCATTAAAGCTTATGAAGCAACAGACCAGGCCATTCTTTCACACAATCCTGATTTGGGGCGAGGAGGATCGACTGCAGTGACTGCAATTATTATAAACAATCAGAAATTATTCGTAGCTAATGTTGGAGATTCACGAGCGGTCCTGTCAAAGGGAGGGGTGGCCATACAGATGAGTATTGATCATGAGCCTAATACTGAAAGGGGCATCATTGAGAACAAAGGCGGCTTTGTTTCAAACTTGCCAGGAGATGTTGCAAGGGTGAATGGGCAACTTGCAGTTTCTCGGGCATTTGGAGACAAAAACCTCAAATCACACTTGCGATCTGATCCGGACGTGCAACAAGATGATATTGACTCGGATACTGAGCTTTTGATACTTGCTAGTGATGGTGTATGGAAGGTAATGGCAAACCAAGAAGCAGTTGATATTGCAAGAAGGATAAGAGATCCACAAAAGGCAGCTAAACAAGTAGCTGCTGAGGCATTGAACAGAGAGAGTAAGGATGATATATCCTGCATTGTAGTTCGTTTCAAGGCATGA 849 0.4393 MDTLCCFTSVTQVVGGRSSSSSGKGKGHQSTVKYGFSLVKGKANHPMEDYHVAKIFQINGQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWTDPSSSIIKAYEATDQAILSHNPDLGRGGSTAVTAIIINNQKLFVANVGDSRAVLSKGGVAIQMSIDHEPNTERGIIENKGGFVSNLPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVQQDDIDSDTELLILASDGVWKVMANQEAVDIARRIRDPQKAAKQVAAEALNRESKDDISCIVVRFKA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0034 282 Gene3D - 16 282 IPR036457 -
Lal3g0034 282 SMART PP2C_4 29 278 IPR001932 -
Lal3g0034 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Lal3g0034 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Lal3g0034 282 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 281 - -
Lal3g0034 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Lal3g0034 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Lal3g0034 282 CDD PP2Cc 32 280 IPR001932 -
Lal3g0034 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0034 Lal-Chr3 202709 205257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0034 1 281 PP2C-type Phosphatase Gene Family AT1G22280 71.080 2.35e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0034 K17506 - gmx:100787659 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0034 3 202709 205257 Lal11g0081 11 540436 544902 LSH