Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal3g0027 | TTATTTCAAACCCTTTCCCTTTCTTCCTTAGATATCCTTGCAGTGATGGCTCTCTTTGTTTTGAGTTTTGTATTGATTTGTTTGTTAATGGTGTGTTGTGAGAGTCAAGTTCTACAAGTGGGGTTCTACTCAAACACTTGTCCTGAAGCTGAGTCCATTGTTCATAATGTTGTTAGAGAAGTTGTCATCTCTGACCACAACATGGCTGCTGTCTTGCTCAGGCTTCACTTTCATGACTGTTTTGTTGAGGGATGTGATGGTTCAATTCTGATAGACAATGGTCCAAGTTCAGAGAAAAATGCATTTGGACATGAAGGGGTTAGAGGGTTTGATGTGATAGAAAGAGCCAAGGAAGAATTGGAAGCTTCTTGCCCTGGTGTAGTTTCTTGTGCAGACATAGTAGCATTAGCAGCAAGAGATGCTATAGTCATGGCAAATGGGCCAATGTACCAAGTTCCAAGTGGGAGGAGAGATGGATTGGCTTCAAATGTTTCACTTGCAGAAGCAATGCCAGATGTTAGTGATTCAATTCAGCTACTCAATGCCAAGTTTCTGAATAAGGGCCTCACACAGAAAGACCTTGTCCTTCTTAGTGGTGCTCATACGATTGGAACCACAGCATGCTTCTTCATGACCAAAAGGCTATACAATTTTTTCCCAAGTAGTGGTAGTGGTAGTGGATCAGACCCAGCTATCAACACAAGGTTCCTTCAAGTACTTAAAGCAAGGTGCCCTCAGAATGGAGATGTTAATGTCCGAATTGCCATTGATGAAGGTGGTCATAACAAATTTGACAAACACATTTTGAACAACATAAGGCAAGGTTTTGCTGTGCTAGAATCTGATGCTAGGCTTAATGATGACATTGTCACCAAGTTTATCATTGACTCTTATTTTAATAATCCAATATTTGGGCCTTCTTTTGAAGCTGATTTTGTTGAGTCCATTGTGAAGATGGGCCAAATTGGAGTCAAGACAGGTTTCCTTGGAGAGATTAGGCACAAGTGCTCAAAGTTCAATTAA | 1023 | 0.4076 | LFQTLSLSSLDILAVMALFVLSFVLICLLMVCCESQVLQVGFYSNTCPEAESIVHNVVREVVISDHNMAAVLLRLHFHDCFVEGCDGSILIDNGPSSEKNAFGHEGVRGFDVIERAKEELEASCPGVVSCADIVALAARDAIVMANGPMYQVPSGRRDGLASNVSLAEAMPDVSDSIQLLNAKFLNKGLTQKDLVLLSGAHTIGTTACFFMTKRLYNFFPSSGSGSGSDPAINTRFLQVLKARCPQNGDVNVRIAIDEGGHNKFDKHILNNIRQGFAVLESDARLNDDIVTKFIIDSYFNNPIFGPSFEADFVESIVKMGQIGVKTGFLGEIRHKCSKFN | 340 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal3g0027 | 340 | PRINTS | Plant peroxidase signature | 47 | 66 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PRINTS | Plant peroxidase signature | 71 | 91 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PRINTS | Plant peroxidase signature | 108 | 121 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PRINTS | Plant peroxidase signature | 127 | 137 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PRINTS | Plant peroxidase signature | 146 | 161 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PRINTS | Plant peroxidase signature | 192 | 204 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PRINTS | Plant peroxidase signature | 271 | 288 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PRINTS | Plant peroxidase signature | 314 | 327 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | Gene3D | - | 41 | 340 | - | - | |
| Lal3g0027 | 340 | Pfam | Peroxidase | 55 | 300 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 193 | 203 | IPR019793 | - | |
| Lal3g0027 | 340 | CDD | secretory_peroxidase | 38 | 339 | IPR033905 | GO:0004601|GO:0042744 | |
| Lal3g0027 | 340 | Gene3D | Peroxidase, domain 2 | 171 | 319 | - | - | |
| Lal3g0027 | 340 | ProSiteProfiles | Plant heme peroxidase family profile. | 37 | 340 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | ProSitePatterns | Peroxidases active site signature. | 69 | 80 | IPR019794 | GO:0004601 | |
| Lal3g0027 | 340 | PRINTS | Haem peroxidase superfamily signature | 69 | 83 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PRINTS | Haem peroxidase superfamily signature | 128 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PRINTS | Haem peroxidase superfamily signature | 146 | 158 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PRINTS | Haem peroxidase superfamily signature | 193 | 208 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PANTHER | PEROXIDASE | 16 | 338 | - | - | |
| Lal3g0027 | 340 | SUPERFAMILY | Heme-dependent peroxidases | 38 | 340 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Lal3g0027 | 340 | PANTHER | PEROXIDASE 25-RELATED | 16 | 338 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal3g0027 | Lal-Chr3 | 158509 | 161513 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal3g0027 | 38 | 340 | Peroxidase | AT1G77100 | 57.843 | 1.35e-113 | 330 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal3g0027 | K00430 | - | gmx:547549 | 492.656 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal3g0027 | 3 | 158509 | 161513 | Lal11g0065 | 11 | 446582 | 450304 | LSH |