Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0014 ATGGACAAGTACGAGCTTGTGAAGGATATAGGAGCTGGCAATTTTGGGGTTGCTAGGCTTATGCGTAACAAAGACACCAAGGAGCTTGTTGCCATGAAATTCATTGAACGTGGTTACAAGATAGATGAGAATGTTGCAAGGGAAATCATAAACCACAGAAGTCTTTGCCATCCCAACATCATTCGCTTCAAGGAGGTGGTGCTGACTCCCACACACCTTGGAATAGTTATGGAGTATGCAGCAGGTGGAGAGCTCTTTGACCGAATTTGCAATGCTGGAAGGTTCAGTGAAGATGAGGCTCGATATTTCTTCCAGCAGCTAATTTCAGGAGTTTGCTACTGTCATTCCATGCAAATCTGCCATCGAGACTTGAAACTGGAGAATACCTTATTGGATGGCAGCCCTGCCCCACGTCTCAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTGCTTCACTCAAAGCCTAAATCAACAGTGGGAACTCCAGCCTACATTGCACCAGAGGTTCTTTCACACAGAGAATATGATGGAAAGATGGCAGATGTATGGTCCTGTGGAGTGACTCTTTATGTAATGCTGGTTGGGGAATACCCATTTGAGGACCAAGAGGATCCTAAAAACTTCAGGAAAACCATAAATCGAATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACACATCTCAAGAGTGCCGCCATCTGCTATCTCACATTTTTGTGGCAAATCCATCTAGGAGAGTGACGATTAAGGAAATAAAGTCCCACCCATGGTTTGTAAAGAACTTGCCTAGAGAATTGACAGAAATGGCTCAAGCTGTGTGCTACAGACAAGAAAATCCAACCTTTTCCCTGCAGTGCATTGAAGACATCATGAATATTGTTGAGGAGGCCAAAACTACAGCTCCAGTTTCTCGGTCAATTGGAGGGTTTGGGTGGGGTGATGAAGAAGAAGAAGAAGAAGATGAAACAGAAGCTGGTGAGGAAGAAGATGAGTATGAAAAGAGAGTGAAGGAGGTGCTGGCTAGCGGAGAATTCCATATCAGTTAA 1053 0.4368 MDKYELVKDIGAGNFGVARLMRNKDTKELVAMKFIERGYKIDENVAREIINHRSLCHPNIIRFKEVVLTPTHLGIVMEYAAGGELFDRICNAGRFSEDEARYFFQQLISGVCYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSKPKSTVGTPAYIAPEVLSHREYDGKMADVWSCGVTLYVMLVGEYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHTSQECRHLLSHIFVANPSRRVTIKEIKSHPWFVKNLPRELTEMAQAVCYRQENPTFSLQCIEDIMNIVEEAKTTAPVSRSIGGFGWGDEEEEEEDETEAGEEEDEYEKRVKEVLASGEFHIS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0014 350 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0014 350 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0014 350 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0014 350 MobiDBLite consensus disorder prediction 315 331 - -
Lal3g0014 350 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lal3g0014 350 MobiDBLite consensus disorder prediction 307 337 - -
Lal3g0014 350 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 344 - -
Lal3g0014 350 PANTHER SERINE/THREONINE KINASE 2 344 - -
Lal3g0014 350 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lal3g0014 350 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lal3g0014 350 SUPERFAMILY Protein kinase-like (PK-like) 1 293 IPR011009 -
Lal3g0014 350 CDD STKc_SnRK2 3 259 - -
Lal3g0014 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0014 Lal-Chr3 91241 95220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0014 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 42.963 1.10e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lal3g0014 Pkinase 7.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0014 K14498 - gmx:100812259 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0014 3 91241 95220 Lal3g0014 3 91241 95220 ECH
Lal5g1854 5 20170762 20175752 Lal3g0014 3 91241 95220 LSH
Lal3g0014 3 91241 95220 Lal11g0025 11 175287 177927 LSH