Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0012 ATGTTTCCTTGCAAGATCAGTTCTTGTATGGCAAATTCAAAGAGCTCATCAGGCATCAGAAACTTGATGTATTCTGGAAAGCACGCACTGCTTCCTCCTAAAATCCCATTTCCCAATGTCTCCCAAGCATATGCTGATCACATACCAAACCCTGCAATTGGTTCGAAGGTTGTGCAGAAACTTAGAGAGGGAAACACACACCACTACCGTACTTCATCTGAGAGCATTGTTATGGAGGAGCAACCTTCATGGCTTGATGATCTTCTTAATGAGCCAGATACACCTGTTAGAAGGGCTGGTCATCGGCGTTCGTCGAGTGACTCATTTGCATACTTAAACTCAGCTGTCGTTTCTAACATTGGTTATGCAGGCCAGAATGAGTATAGGTTTAGGAATATGGTATCTATCCCATCTTGGTCATCTCAAGACTTTGATCACAGCAAAGATGTGCATCATATGCCCATGCACACAGAAATGAACTCAACAAAACTGAAGAGTAAGGCATGGGATTCTTGTTTAAATGTTCCTTCTGGCAAAGACAATGTTGCTATTCAGAGTTCAGGATTGTCATGCCCACCGCATGAAGCAGATGGGGTTCCATCAACTGCAAATGAAAAGCACGATTCAGTTGAATCTGGTGCACTGGATGCAAAGTCATTGCCCGAAAGAAAGGATGGCACAAATACAAAATCAGCTGCTTCTGAAACAGATACAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTCCGTAAACTTCAATACATAGCTGAATTGGAAAGGAATGTTTGTGGTTTACAGGCAGAGGGATCCGAAGTATCAGCGGAGCTTGAATTTCTTAACCAGCAGAATCTTATCCTCAGTATGCAGAATAAAGCTCTCAAGCATCACTTAGAAAGTTTAGCACAAGAGAAGCTAATCAAATACTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGATTGCGTGCATTATATCAGCAGCAGCAACAGCCACCACAGCAACCATCTGCTGGTCATGGCCATCGTCGATCAAGCAGCCTTGAATTCCAGTTGGCAAACCTTTCCTTAAAACACAAGGAAACAACCCCTTTTCCTTAA 1104 0.4303 MFPCKISSCMANSKSSSGIRNLMYSGKHALLPPKIPFPNVSQAYADHIPNPAIGSKVVQKLREGNTHHYRTSSESIVMEEQPSWLDDLLNEPDTPVRRAGHRRSSSDSFAYLNSAVVSNIGYAGQNEYRFRNMVSIPSWSSQDFDHSKDVHHMPMHTEMNSTKLKSKAWDSCLNVPSGKDNVAIQSSGLSCPPHEADGVPSTANEKHDSVESGALDAKSLPERKDGTNTKSAASETDTKRAKQQFAQRSRVRKLQYIAELERNVCGLQAEGSEVSAELEFLNQQNLILSMQNKALKHHLESLAQEKLIKYLEQEVLEREIGRLRALYQQQQQPPQQPSAGHGHRRSSSLEFQLANLSLKHKETTPFP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0012 367 MobiDBLite consensus disorder prediction 328 348 - -
Lal3g0012 367 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 10 363 - -
Lal3g0012 367 SMART brlzneu 235 294 IPR004827 GO:0003700|GO:0006355
Lal3g0012 367 MobiDBLite consensus disorder prediction 184 246 - -
Lal3g0012 367 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 363 IPR044797 -
Lal3g0012 367 CDD bZIP_plant_RF2 237 285 IPR044759 GO:0003700|GO:0006355
Lal3g0012 367 Gene3D - 239 297 - -
Lal3g0012 367 SUPERFAMILY Leucine zipper domain 246 288 IPR046347 GO:0003700|GO:0006355
Lal3g0012 367 MobiDBLite consensus disorder prediction 200 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0012 Lal-Chr3 83218 86336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0012 29 309 bZIP Transcription Factor Family AT2G42380 31.849 1.59e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0012 - - gmx:100813098 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0012 3 83218 86336 Lal3g0012 3 83218 86336 ECH