Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1975 ATGGGGAATTATGGTTATAATGGTATAAAGGCGATTGAGGAGCTAGTGAGAGGGCGTGAATGTGCAAAGCAACTAAGAGATATGATGAATGGAGATGATAGATCATCATTGAATGAGGAGCTAATTGTGAAGAAGGTGCTCATGTCCTTCACCAACTCACTCTTCCTCTTGAATAAAAACCCAACTTCACAGGTTAATAATCCAACTATATCTCACGAGTCTCAACAGAGTAATAAGGAAAGAAGAGGCTGTTATAAGAGAAGAAGAACTTCACAAACATGGGAACATGAATCTGAAACTCCACTTGAAGATGGCCATCAATGGAGAAAGTATGGCCAAAAAGTGATCCTCAATGCCAAATATCCCAGGAATTACTATAGGTGTAGTCACAAATATGATCAAAATTGCCAAGCAATGAAACAGGTGCAGAGAGTTGAAGATAACCCTCCAGTTTACAAGACCACATATTATGGCAACCACAGTTGCAGAAACTTGTTAAACCCTGAAATCATACTTGATGATTCCACTTCTCCTTCTCACTCTTTTGTTTTCCTAGCTTTGATAACACCTTCCCAGCACCAGCCAAATTACAAGACTGCCCCTCCTTTCTCTCATCAAAACCATTAG 627 0.3971 MGNYGYNGIKAIEELVRGRECAKQLRDMMNGDDRSSLNEELIVKKVLMSFTNSLFLLNKNPTSQVNNPTISHESQQSNKERRGCYKRRRTSQTWEHESETPLEDGHQWRKYGQKVILNAKYPRNYYRCSHKYDQNCQAMKQVQRVEDNPPVYKTTYYGNHSCRNLLNPEIILDDSTSPSHSFVFLALITPSQHQPNYKTAPPFSHQNH 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1975 208 ProSiteProfiles WRKY domain profile. 97 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g1975 208 PANTHER WRKY TRANSCRIPTION FACTOR 70-RELATED 5 196 - -
Lal2g1975 208 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 196 IPR044810 GO:0003700
Lal2g1975 208 MobiDBLite consensus disorder prediction 61 102 - -
Lal2g1975 208 Gene3D WRKY domain 83 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal2g1975 208 SUPERFAMILY WRKY DNA-binding domain 99 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal2g1975 208 SMART WRKY_cls 102 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g1975 208 Pfam WRKY DNA -binding domain 103 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g1975 208 MobiDBLite consensus disorder prediction 75 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1975 Lal-Chr2 21923317 21924826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1975 9 181 WRKY Transcription Factor Family AT3G56400 37.864 7.35e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal2g1975 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1975 - - gmx:100170682 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1975 2 21923317 21924826 Lal2g1975 2 21923317 21924826 ECH
Lal2g1975 2 21923317 21924826 Lal9g1722 9 19443027 19444560 LSH
Lal2g1975 2 21923317 21924826 Lal19g0006 19 55406 57774 PCT
Lal19g0006 19 55406 57774 Lal2g1975 2 21923317 21924826 PCT