Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal2g1972 | ATGGTATCCATGAACCTCAAATTCAATCCTACTTCTTCATTTATTCTCTCTCAATTCTTACTTCCTCCTCCTCTTTCTAATCTTACACTTAGTACTTCTACTACTACTACTACTACTACTACAGCAAACACAAAGTTGAACACTTTTCAGCTCAAGGCTTCTTTCTGGGAATCTATCAAATCTGGGTTGATAAAGAATAACAGGACACAAGTTATCGATCCACCCTCCACAGAGGAAGAAGAAGAAGAAGAAGAAGAAGATGAAACTCTGGCTCAAGAGTTTGTCCTTGTTGAAAAGACTGAACCTGATGGAACAATTGAGCAAATAATATTCTCTTCGGGTTCCGATATTGATGTTTATGATATTCAAGCCCTCTGCGACAAGGTAGGGTGGCCACGTAGGCCATTGTCAAAACTAGCTGCTGCCTTGAAAAATAGCTACATAGTGGCCTCATTGCATTCTGTAAGAAAGTCAGAGGGGAATGAAGAAAAGAGATTAATTGGTATGGCTCGTGCCACATCAGACCATGCCTTCAATGCCACAATTTGGGATGTCCTAGTTGATCCTGCCTACCAGGGCCAAGGTCTCGGTAAAGCTCTTGTTGAGAAGCTGATACGAACTCTTCTTCAAAGGGACATTGGCAATATAACTCTCTTTGCAGATAGTAAAGTTGTGGAATTTTACAGCAATTTAGGCTTTGAAGCTGATCCAGAGGGCATAAAAGGCATGTTTTGGTACCCAAATTACTAA | 750 | 0.4067 | MVSMNLKFNPTSSFILSQFLLPPPLSNLTLSTSTTTTTTTTANTKLNTFQLKASFWESIKSGLIKNNRTQVIDPPSTEEEEEEEEEDETLAQEFVLVEKTEPDGTIEQIIFSSGSDIDVYDIQALCDKVGWPRRPLSKLAAALKNSYIVASLHSVRKSEGNEEKRLIGMARATSDHAFNATIWDVLVDPAYQGQGLGKALVEKLIRTLLQRDIGNITLFADSKVVEFYSNLGFEADPEGIKGMFWYPNY | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal2g1972 | 249 | CDD | NAT_SF | 162 | 218 | - | - | |
| Lal2g1972 | 249 | Pfam | Acetyltransferase (GNAT) family | 118 | 233 | IPR000182 | GO:0016407 | |
| Lal2g1972 | 249 | PANTHER | ACETYLTRANSFERASE NSI | 29 | 249 | - | - | |
| Lal2g1972 | 249 | MobiDBLite | consensus disorder prediction | 67 | 87 | - | - | |
| Lal2g1972 | 249 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 109 | 249 | IPR000182 | GO:0016407 | |
| Lal2g1972 | 249 | Gene3D | - | 113 | 246 | - | - | |
| Lal2g1972 | 249 | PANTHER | ACYL-COA N-ACYLTRANSFERASE | 29 | 249 | IPR045039 | GO:0008080 | |
| Lal2g1972 | 249 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 117 | 238 | IPR016181 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal2g1972 | Lal-Chr2 | 21905600 | 21907550 | Dispersed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | GNAT | Lal2g1972 | Acetyltransf_1 | 1.4e-14 | CL0257 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal2g1972 | K22450 | - | gmx:100799333 | 358.221 |