Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1962 ATGGGGTGCTTCACTGTATTGAAGAGCAAGAAGAAAAAGTCTGATCAAATTGCGTATGGAAAACGCATAAGCCATAATGACAATGTACCAACGGTGCTGCCTAAACCTCAGACTCATACTCGATCACTCCAATCTGCACCTCCTAGTTTTAGGACCAAAGTGAAACCAATTCAAACTGTTAAAAAAATCAATAACAATAGAGCACGAGCATTATCTGCTCCATCAACTCTTGATGCAGCAGAACAAAATGCATTGGCCTCATTTGAGTATGAGGAACAAGAAGAGCCAAAACACCGAACCGGGGCGATGAAGGAGCAACAGTCGTCTACTCCACATCCTCTACCCCTTCCTTCACCTCAGGGTGGTGCGGCTTTGAAGGCTATGGGCAGCTTTAAGTCTGTGGCAGCCGGTGGTCCTCTATCTGCTTCCGGAACTTTGCCGCTTCCACCTACAGGTTCACTTCGGAACTTTCAGTATGACGAAATAGCTGTTGCTTGCCTTAATTTCTCTTCAGATCGATGCATGTCGGAATGTCTTTCTTCTACCATATATAAAGCTTCCTTTGGTGACGATGTTTCAAGTTCAAAGAGGTTTGAAGCGACTGTCACACGCCTTCACCCATCAACTCAGGGGTTGAAGGAATTTATGAATGAGGTTAATACTCTTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTAGGATTTCATGCACGCGATGGTTCAGAGCAGAGATTGTTGGTGTATGAAAGGCTATACCATGGAAGCTTGGACCGCTTGTTGTATGGGAGATCTGATGGCCCGTCAATTGATTGGAATACAAGAATGAAAATTGCTATGTGTGCTGCAAAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAGTTTTCAACAGCCAACATACAAATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGCCGGACATATTCCCAATGAAGAGATTTCAAGCAGTTCTTCTGCTGTCGGAAACCTATCAATCGAGACACTGGAAAAAGGGATGCTTACTCCGAAGAGCAACGTATGGAGTTTCGGAATTTTTCTTCTGGAGCTACTTACCGGAAGAAAGAATCTCGATAGCCGTCACCCCAAGGAAGAGAGGAACTTAGTCAAGTGGAGCAGGCCTTTCCTAGCCGATGAATATCGGCTGTCTTTGATCATGGACCATCAACTTAAAGGTCGCTTTCCAGCCAAGGCGGCAAGAACAATAGCTGACATTGCACAAAGATGTCTTCAAAAGGAGCCATCAGAAAGGCCTACCATGAGAACTGTTGTTAAGCATCTCAAGATGATCCAAGATGTCAAGTACTCATGTCGGTTCCCGTTGCAGGAGCCAGCAGCAATATCTGGAAAACATATGTGGAGATCACCAAGTCTTAACGGTATCATCTTCCCTGTACCTAGGTCGAGTTTCTCTCCATCGCCGCCATCATCGGGAACACTACTTTCTGTTTCGCCACCAAGATGGTCAGGAGTGCCTATAGTCCTGCCTCCAAGAGCTTGTTTGAAAGAGTTTGATAGGCAAGAAAGCAGAAAGTCATCATCTTCAGCCTCTAGGAGGCCTAGTGTTGAAGGATTTTGA 1629 0.4469 MGCFTVLKSKKKKSDQIAYGKRISHNDNVPTVLPKPQTHTRSLQSAPPSFRTKVKPIQTVKKINNNRARALSAPSTLDAAEQNALASFEYEEQEEPKHRTGAMKEQQSSTPHPLPLPSPQGGAALKAMGSFKSVAAGGPLSASGTLPLPPTGSLRNFQYDEIAVACLNFSSDRCMSECLSSTIYKASFGDDVSSSKRFEATVTRLHPSTQGLKEFMNEVNTLASLQHPNLCKLLGFHARDGSEQRLLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAKGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPNEEISSSSSAVGNLSIETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADEYRLSLIMDHQLKGRFPAKAARTIADIAQRCLQKEPSERPTMRTVVKHLKMIQDVKYSCRFPLQEPAAISGKHMWRSPSLNGIIFPVPRSSFSPSPPSSGTLLSVSPPRWSGVPIVLPPRACLKEFDRQESRKSSSSASRRPSVEGF 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1962 542 Pfam Protein tyrosine and serine/threonine kinase 184 444 IPR001245 GO:0004672|GO:0006468
Lal2g1962 542 MobiDBLite consensus disorder prediction 30 52 - -
Lal2g1962 542 MobiDBLite consensus disorder prediction 90 120 - -
Lal2g1962 542 MobiDBLite consensus disorder prediction 521 542 - -
Lal2g1962 542 SUPERFAMILY Protein kinase-like (PK-like) 149 455 IPR011009 -
Lal2g1962 542 MobiDBLite consensus disorder prediction 26 52 - -
Lal2g1962 542 PANTHER OS01G0822200 PROTEIN 45 541 - -
Lal2g1962 542 Gene3D Transferase(Phosphotransferase) domain 1 252 456 - -
Lal2g1962 542 Gene3D Phosphorylase Kinase; domain 1 149 250 - -
Lal2g1962 542 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1962 542 PANTHER OS01G0588500 PROTEIN-RELATED 45 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1962 Lal-Chr2 21864635 21869142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1962 141 450 Receptor kinase-like Gene Family AT4G02010 37.778 5.75e-58 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lal2g1962 PK_Tyr_Ser-Thr 9.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1962 - - gmx:100808712 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1962 2 21864635 21869142 Lal2g1962 2 21864635 21869142 ECH
Lal2g1962 2 21864635 21869142 Lal9g1719 9 19421045 19425118 LSH
Lal2g1962 2 21864635 21869142 Lal14g0819 14 10281283 10283747 PCT
Lal14g0819 14 10281283 10283747 Lal2g1962 2 21864635 21869142 PCT