Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1946 ATGGGAGGGTGTTGTAGCCATGATGTTAGTATTAGAGGTAGGGTGGAAAGTGAGGTGGATGATGGAGAATATGAGAATGATCATAGCAGTACTCATGTCACATATGAACGTGATGGATCAAGGGTCATGTTAAAAGGTTCCTCTATGTTTGTATCAATGAATAGCCAACAGGGTAATAAAGGTGTCAATCAAGATGCAATGACAGTTTGGGAAGACTTCACTGGAGAAAAACATATGGTATTTTGTGGTGTGTTCGATGGTCATGGTCCTCTAGGCCACAAGGTTTCACAATACATTCGTGACAAGTTACCCTTAAAACTGTCTGAAGCAATCAAAATGTCACAACATAAGGCATGCAGATTTTATGATGCTAATGATTCAGAAAGTGAAAGTTTTTATGATAATGATATATATGATGACAATAATCAAACCATGTCTCTTGCTGCATGGGAAGGTTGCTTTCTAAAGTCCTTTGATGAAATTGATGAACACCTTGCTCATGAAATTAATATTGATACCTATTGTAGTGGTAGCACTGCTGTAACGGTTATTAAACAGGGTGACCAGCTTATAGTTGGAAATTTGGGTGATTCTAGAGCAGTTCTTTGCACAAGAGGGGATAGAAATCAACTCATTCCTGTTCAACTTACTGTTGACTTGAAACCTGATATTCCAAGTGAAGCTTCAAGAATCATGAGCTGTGAAGGCAGAATTTTTGCAGGAGAAGAAGAACTAGACGTGTATAGAATATGGATGCCTGATGATGATTGTCCTGGACTAGCCATGTCAAGAGCCTTTGGAGACTTTTGTCTAAAAGATTATGGCCTTATTTCAGCTCCTGATGTCTTTTATAGAAAACTTACAAAACAAGATCAATTTGTGGTTTTGGCAAGTGATGGGGTGAGTAATATAGTATTAGATGGAATCAGTGTTATAAATTGCGAGCGCAATATTGCGGTTGCGGTGACCGCCGCAACCGCAATTGCAGTATGGGATGTGCTCACTAACAATGAAGTAATAAACATTGTTGCTTCAGCACCAAGAAGATCCATAGCAGCAAAAATGCTCGTAAAGCGTGCGGTTCGAGCATGGCGATACAAGTATCCCAGTTCGAAGGTTGATGATTGTGCAGCCATATGCTTGTTTGTTGATGATAACCCAGTGTTGTCTCAATCCCAATCCAACAAGAACTTCAGCCATGGAAGTCATAGAAATCACAGCAAGAACCAGTTTCGTCGGTCGAAATCGACTAGAAATGAAGACACTGAAACTGTGGATGGCAAAGTTGGTTTAGAACTGAATCAAGAATGGAAAGGTCTTGGAGGATTAGTTAGATCCAACTCAATATCAAAACTTCCAAGGATAACAAAGAACATGAGTAAACATCAAGCATCAAAATACTACTATAAGGGGAGTTAG 1419 0.3939 MGGCCSHDVSIRGRVESEVDDGEYENDHSSTHVTYERDGSRVMLKGSSMFVSMNSQQGNKGVNQDAMTVWEDFTGEKHMVFCGVFDGHGPLGHKVSQYIRDKLPLKLSEAIKMSQHKACRFYDANDSESESFYDNDIYDDNNQTMSLAAWEGCFLKSFDEIDEHLAHEINIDTYCSGSTAVTVIKQGDQLIVGNLGDSRAVLCTRGDRNQLIPVQLTVDLKPDIPSEASRIMSCEGRIFAGEEELDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLISAPDVFYRKLTKQDQFVVLASDGVSNIVLDGISVINCERNIAVAVTAATAIAVWDVLTNNEVINIVASAPRRSIAAKMLVKRAVRAWRYKYPSSKVDDCAAICLFVDDNPVLSQSQSNKNFSHGSHRNHSKNQFRRSKSTRNEDTETVDGKVGLELNQEWKGLGGLVRSNSISKLPRITKNMSKHQASKYYYKGS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1946 472 MobiDBLite consensus disorder prediction 393 427 - -
Lal2g1946 472 ProSiteProfiles PPM-type phosphatase domain profile. 50 383 IPR001932 -
Lal2g1946 472 CDD PP2Cc 49 383 IPR001932 -
Lal2g1946 472 PANTHER ALPHABET, ISOFORM E-RELATED 330 434 - -
Lal2g1946 472 PANTHER ALPHABET, ISOFORM E-RELATED 1 315 - -
Lal2g1946 472 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 315 - -
Lal2g1946 472 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 330 434 - -
Lal2g1946 472 SUPERFAMILY PP2C-like 330 385 IPR036457 -
Lal2g1946 472 SUPERFAMILY PP2C-like 42 305 IPR036457 -
Lal2g1946 472 MobiDBLite consensus disorder prediction 413 427 - -
Lal2g1946 472 SMART PP2C_4 40 381 IPR001932 -
Lal2g1946 472 Gene3D - 43 384 IPR036457 -
Lal2g1946 472 Pfam Protein phosphatase 2C 54 308 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1946 Lal-Chr2 21719604 21722760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1946 1 409 PP2C-type Phosphatase Gene Family AT5G01700 46.455 4.24e-122 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1946 - - gmx:100783603 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1946 2 21719604 21722760 Lal2g1946 2 21719604 21722760 ECH
Lal2g1946 2 21719604 21722760 Lal9g1702 9 19275789 19279850 LSH
Lal2g1946 2 21719604 21722760 Lal1g2275 1 24692910 24696018 LSH