Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1941 ATGGACAACAATAATTGGTGGCATGTTAAGGATTTTTGCACATACCCTTTGCATATTTTAGACTCTTGTTCAAATACACTTACTCAATGTTGCAATGTAGCTGAATCTAGAAGGAAAAAATGCAGTTTTGTGTACTTTGCATCATTGTTCATGTTTTTGCAAGTTGTGGTTTCTTCTTGTACTTTTGTAACAGGACACCAGTTGTTTGATGGAGTGGTTGTGACAAAATCAGATTATGAAGCATTAAGGGCACTGAAGCATGATCTTATTGACTTCAAAGGGGTTCTTAGAAGCTGGAATGAAAGTGGTGTTGGTGCATGTTCAGGTTCATGGGTTGGTATCAAATGTGTTAATGGAAAGGTTATAGCAATTCAACTTCCTTTTAAAGGTTTAGGTGGAAAAATCTCTGACAAAATTGGTCAACTTCAATCTTTAAGAAAGATTAGTTTTCATGATAATCTTCTAACTGGTCCTATCCCTTATTCTCTTGGTTTTCTTCCTAATCTTAGAGGTGTTTATCTCTTCAATAACATGCTTTCAGGTTCTATTCCTCCTTCTATTGGTAATTGCATAATGCTTCAATCTCTTGATGTTAGCAATAACTTACTTATTGGTAAAATCCCTCCAAATTTATCAAACTCTAGTAGGATTTATAGGATCAATTTGAGCTTCAATTCACTTCATGGATCTATTCCTAGTAGTCTCACTATGTCTCATTCTCTTACTATTCTTGCATTACAATATAACAATCTTTCTGGTTCTATACCAAATCATTGGGGTGGAATGGGAAAAAACAAAGGTTTTGATTCCAAACTTCAGGTTTTGACACTTGATCATAATCTCATTTCTGGTACTATTCCAGTTTCTTTAAGCAAGTTGAGTTTTGTTGAGAACATTTCTTTAAGTCATAACCAGATTGTAGGGTCTATTCCAAGTGAACTACATGCACTTTCAAGGCTTAGATTTCTTGATCTATCAAACAATGGCATAAATGGTAGCATTCCTAAAACCTTCTCCAACTTAACTTCTCTTGTTTCATTGAACTTAGAGGGAAACAAACTTGAAAATCATATACCAGATAGTTTGGACATGTTGCATAACCTTTCTGTGCTTAACCTCAAGAACAATAAGCTTGATGGTAAAATCCCATCAACAATAGGGAACATCATAGGCATCATCAAAATTGATCTCTCCAAAAACAAGTTATTTGGAGAAATTCCTGATTCTTTTGCCAAACTTGCAAACTTGAGTTTTTTCAATGTCTCTTACAATAATCTTTCTGGTCCTGTCCCTTCTCTCCTTACCAAAAGATTCCATTCAAGTTCCTTCAAAGGGAATCTTCATCTATGTGGATTTATTGCATCAAAACTATGCCCTTCACCCTCACCTCAGATTCTTCCATCTCCAACACAAAAGCCTTCTACAAAGCCAAATCATCATAAATTAGGCACCATGAGCATACTCCTAATAGCAGCAGGCATTATCATCATAATACTCTTAGTAACATGCTTCTTCTTATTGTGTTGTTTGGTTAAGAAAAGGGGTGATTCAAAAGGAAAGAATGGTAAGGCAAAAGCAGCAGCATCTGCTAAAAGTATCGAAAAAGGCGGCGGCAGAGCCGGTGGTGGTGGAATAGAATCATCAGAAGGTGAAGCTGGTGGGAAACTAGTTCACTTTGATGGACCATTTGTGTTTACAGCTGATGATCTTCTATGTGCAACTGCTGAGATAATGGGAAAAAGTCCATATGGAACAGCATATAAAGCAACATTGGAAGATGGAAACCAAGTTGTTGTGAAAAGGTTAAGGGAGAAAAGTACTAAAGGGCATAAAGAGTTTGAAACTGAGGCTGCTTCACTTGGAAAAATCAGACACCAAAATCTGTTGGCACTTAGAGCTTACTATTTAGGACCAAAAGGAGAGAAGCTGCTTGTCTTTGATTACATGACCAAAGGAAGCTTAGCATCATTCCTTCATGGTAAGGGGCCTGAAAGTGTTATTGAGTGGAGAACAAGGATGAAGATAGTAATTGGAATAACACATGGTTTGTACCATCTCCATAAGGAAGAGGATATAGTACATGGAAATCTTACATCTAGCAATATACTATTAGATGAGCAAACAAATCCTCACATTACAGATTTTGGACTTTCAAGGCTAATGACAAATTCTGCTACCACAAACATCATTGCTAGTGCAGGAAGTGTTGGATATAATCCACCTGAACTTTCAAAGACTAAGAAGCCAAATCAAAAGACTGATATTTATAGCCTTGGTGTTATCATTTTGGAGCTCCTAACTGGTAAACCACCAGGTGAGAGAAGTAATGGTATGGAATTGGTTGAATGGGTGGCATCAATAGTAAAGGAAGAGTGGAAAAATGAAGTATTTGATTTGGAACTAATGAAGGATGAAGCAGCTATAAGTGATAAACTACTTAATACATTGAAATTAGCTCTTAATTGTGTGGATCCTTCTCCATCATCAAGACCAGATATTCATCAACTTCTTCACCAATTGGACCAAATCAACACTTGA 2538 0.3649 MDNNNWWHVKDFCTYPLHILDSCSNTLTQCCNVAESRRKKCSFVYFASLFMFLQVVVSSCTFVTGHQLFDGVVVTKSDYEALRALKHDLIDFKGVLRSWNESGVGACSGSWVGIKCVNGKVIAIQLPFKGLGGKISDKIGQLQSLRKISFHDNLLTGPIPYSLGFLPNLRGVYLFNNMLSGSIPPSIGNCIMLQSLDVSNNLLIGKIPPNLSNSSRIYRINLSFNSLHGSIPSSLTMSHSLTILALQYNNLSGSIPNHWGGMGKNKGFDSKLQVLTLDHNLISGTIPVSLSKLSFVENISLSHNQIVGSIPSELHALSRLRFLDLSNNGINGSIPKTFSNLTSLVSLNLEGNKLENHIPDSLDMLHNLSVLNLKNNKLDGKIPSTIGNIIGIIKIDLSKNKLFGEIPDSFAKLANLSFFNVSYNNLSGPVPSLLTKRFHSSSFKGNLHLCGFIASKLCPSPSPQILPSPTQKPSTKPNHHKLGTMSILLIAAGIIIIILLVTCFFLLCCLVKKRGDSKGKNGKAKAAASAKSIEKGGGRAGGGGIESSEGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSPYGTAYKATLEDGNQVVVKRLREKSTKGHKEFETEAASLGKIRHQNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHGKGPESVIEWRTRMKIVIGITHGLYHLHKEEDIVHGNLTSSNILLDEQTNPHITDFGLSRLMTNSATTNIIASAGSVGYNPPELSKTKKPNQKTDIYSLGVIILELLTGKPPGERSNGMELVEWVASIVKEEWKNEVFDLELMKDEAAISDKLLNTLKLALNCVDPSPSSRPDIHQLLHQLDQINT 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1941 845 Gene3D Transferase(Phosphotransferase) domain 1 650 845 - -
Lal2g1941 845 Pfam Leucine rich repeat 271 330 IPR001611 GO:0005515
Lal2g1941 845 SUPERFAMILY Protein kinase-like (PK-like) 576 841 IPR011009 -
Lal2g1941 845 CDD STKc_IRAK 578 843 - -
Lal2g1941 845 Pfam Leucine Rich Repeat 193 213 IPR001611 GO:0005515
Lal2g1941 845 MobiDBLite consensus disorder prediction 515 547 - -
Lal2g1941 845 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 38 844 - -
Lal2g1941 845 SUPERFAMILY L domain-like 98 454 - -
Lal2g1941 845 Pfam Leucine rich repeat N-terminal domain 76 116 IPR013210 -
Lal2g1941 845 ProSiteProfiles Protein kinase domain profile. 572 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1941 845 SMART LRR_typ_2 365 389 IPR003591 -
Lal2g1941 845 SMART LRR_typ_2 341 364 IPR003591 -
Lal2g1941 845 SMART LRR_typ_2 166 190 IPR003591 -
Lal2g1941 845 SMART LRR_typ_2 317 340 IPR003591 -
Lal2g1941 845 Gene3D Phosphorylase Kinase; domain 1 578 649 - -
Lal2g1941 845 Gene3D Ribonuclease Inhibitor 268 464 IPR032675 -
Lal2g1941 845 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 38 844 - -
Lal2g1941 845 Pfam Protein kinase domain 575 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1941 845 Gene3D Ribonuclease Inhibitor 74 267 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1941 Lal-Chr2 21682839 21687526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1941 69 843 Receptor kinase-like Gene Family AT3G51740 62.259 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal2g1941 Pkinase 2.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1941 - - gmx:100819102 1128.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1941 2 21682839 21687526 Lal2g1941 2 21682839 21687526 ECH