Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1940 ATGACCGTTTTACTCTTCTTCCTTCTTCTCCTTTTCCTCCTTTTCCAAAACGGTGTCGTTTCTCTTTCCTCTGATGGTCTCGCACTTCTTACTCTAAAATCCGCCGTCGATATAAGAAGCGCCGCCGCATTCTCCGACTGGAACGACGGCGACAGTGTCCCTTGCACTTGGTCCGGCATCACCTGCGCTAATATTTCCGGCGAAGTTGACCCCCGAGTCGTCGGTATTTCACTTCCCGGCAAGGGTCTCCGCGGCTACCTCCCGTCGGAACTCGGAAACCTCCGCTATCTTCGCCGCATAAACCTTCACACCAACGCCTTCCATGGCCAAATCCCCTCCCCTCTCTTCAACGCCATCGCGCTCCACAGTGTTTTCCTTCACGGCAACAATCTCTCCGGCGAGCTTCCTCCCTCCGTCTTCAACCTCCGCCGCCTCCAAAACCTCGACCTCTCCGACAACTCCATCTCCGGCGACATACCCGAAACCCTAAAAAACTGCTCCCAATTGCAGCACCTAATCCTCGCCCGGAACAAATTCTCCGGCGAAATCCCGGCGACTCCATGGCCGGAGATGAAGAACCTTGTCCAACTCGACCTCTCCTCAAACCTTCTTAACAGTTCAATCCCTGACCAAATCGGAGAGATTAAATCCCTCGCCGGAACTCTAAACCTTTCGTTCAACCACCTCACCGGAAAAATACCAAAATCCCTCGGAAACTTACCTGTAACCGTAAGCTTCGATCTCCGAAACAATAATTTCAGCGGCGAAATCCCTCAAACGGGGTCGTTTTCGAACCAAGGACCCACAGCATTTCTCAATAACCCTAATCTCTGCGGTTTCCCGCTTCAAAAACAATGCACCGGTTCAGCACCTAGCCAGACCGGTTCAAATCCCGGTTCAACTCGTGAACCGGTCGAAAAGCGAAAAGGGCTGAATCCCGGTTTAATTATTTTAATCTCAGTAGGTGATGCTACTGGAGTAGCATTAATTGGGTTAGTAATTGTTTATATTTATTGGAAAAAGAAAGATAATTCAAATGGGTGTAGATGTAGTTGCACTGGCAAAACCAAATTAGGCAATAGTGGGAACAATAAGAATGAAAAATTATTGAGTATTTTTTGTTGTAGTTCTTGTTCTTCATTGCCATGTATGAATGATAATGAGATGAAGAGTGATGAATCTGAAATGGAGGAATGTGAGAAAGGTGAAGGTAGTGGAAGAGGGGAAGGAGATTTGGTAGCAATTGATAAAGGTTTTAATTTTGAGCTAGATGAGCTTTTGAGAGCAAGTGCTTATGTTTTAGGGAAAAGTGGATTAGGGATTGTGTATAAAGTTGTTTTGGGGAATGGGGTTCCTGTGGCTGTAAGAAGATTAGGTGAGGGTGGAGAACAAAGGTATAAGGAATTTTCTGCTGAGGTTCAAGCTATTGGGAAAATCAAGCACCCTAATATTGTGAAGTTGAGAGCTTATTATTGGGCTTTTGATGAGAAGCTTTTGATAAGTGATTTTATCTCCAATGGCAATTTGGCCACTGCACTTAGAGGGAGAAATGGTCAACCATCTCCAAACCTTTCATGGTCAACAAGGCTAAGAATCATGAAAGGAACAGCTAGGGGCTTGGCCTATCTCCATGAATGCAGTCCAAGAAAATTTGTCCATGGTGACATCAAACCCTCCAATATCCTCCTTGACACAGATTTCCAACCCCACATTTCCGATTTCGGGCTTAACCGGCTAATCTGCATCACAGGCAACAACCCATCCTCTGGTGGCTTAATGGGTGGAGCACTTCCTTACTTCAAGTCATCACAAACAGAACAAACCAACAATTATAAAGCCCCAGAGGCCAGAGTCACAGGGTGCAGCAAACCTACACAGAAATGGGATGTGTATTCATTCGGAGTTGTGTTACTTGAATTGCTTACTGGGAAGTCCCCAGATTCATCTCCAGCTGCAACAACATCAACTTCTTCTGAAGTCCATGTCCCTGACTTGGTAAGGTGGGTAAGGAAAGGGTTTGAACAAGAAAGTCCATTGTCTGAAATGGTTGACCCTTCACTTCTACAAGAAGTGCATGCCAAGAAAGAAGTTCTAGCTGTGTTTCATGTAGCTCTATCATGCACTGAAAGTGACCCTGAGGCCAGGCCTAGAATGAAGACTGTCTCTGAAAATCTTGAAAAAATATGA 2187 0.4572 MTVLLFFLLLLFLLFQNGVVSLSSDGLALLTLKSAVDIRSAAAFSDWNDGDSVPCTWSGITCANISGEVDPRVVGISLPGKGLRGYLPSELGNLRYLRRINLHTNAFHGQIPSPLFNAIALHSVFLHGNNLSGELPPSVFNLRRLQNLDLSDNSISGDIPETLKNCSQLQHLILARNKFSGEIPATPWPEMKNLVQLDLSSNLLNSSIPDQIGEIKSLAGTLNLSFNHLTGKIPKSLGNLPVTVSFDLRNNNFSGEIPQTGSFSNQGPTAFLNNPNLCGFPLQKQCTGSAPSQTGSNPGSTREPVEKRKGLNPGLIILISVGDATGVALIGLVIVYIYWKKKDNSNGCRCSCTGKTKLGNSGNNKNEKLLSIFCCSSCSSLPCMNDNEMKSDESEMEECEKGEGSGRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFSAEVQAIGKIKHPNIVKLRAYYWAFDEKLLISDFISNGNLATALRGRNGQPSPNLSWSTRLRIMKGTARGLAYLHECSPRKFVHGDIKPSNILLDTDFQPHISDFGLNRLICITGNNPSSGGLMGGALPYFKSSQTEQTNNYKAPEARVTGCSKPTQKWDVYSFGVVLLELLTGKSPDSSPAATTSTSSEVHVPDLVRWVRKGFEQESPLSEMVDPSLLQEVHAKKEVLAVFHVALSCTESDPEARPRMKTVSENLEKI 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1940 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Lal2g1940 728 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 728 - -
Lal2g1940 728 MobiDBLite consensus disorder prediction 288 307 - -
Lal2g1940 728 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 5 728 - -
Lal2g1940 728 Gene3D Phosphorylase Kinase; domain 1 416 503 - -
Lal2g1940 728 Pfam Leucine rich repeat 121 179 IPR001611 GO:0005515
Lal2g1940 728 SMART serkin_6 432 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1940 728 Pfam Protein kinase domain 433 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1940 728 SUPERFAMILY L domain-like 24 283 - -
Lal2g1940 728 Pfam DNA binding protein S1FA 307 341 IPR006779 GO:0003677|GO:0005634|GO:0006355
Lal2g1940 728 Gene3D Transferase(Phosphotransferase) domain 1 504 728 - -
Lal2g1940 728 Gene3D Ribonuclease Inhibitor 188 288 IPR032675 -
Lal2g1940 728 Gene3D Ribonuclease Inhibitor 22 187 IPR032675 -
Lal2g1940 728 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Lal2g1940 728 ProSiteProfiles Protein kinase domain profile. 428 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1940 728 SUPERFAMILY Protein kinase-like (PK-like) 433 725 IPR011009 -
Lal2g1940 728 CDD STKc_IRAK 434 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1940 Lal-Chr2 21676791 21682579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1940 20 728 Receptor kinase-like Gene Family AT1G67510 67.313 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal2g1940 Pkinase 7.5e-34 CL0016
TF S1Fa-like Lal2g1940 Pkinase 7.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1940 - - gmx:100795021 1092.41