Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1932 ATGAAGGATTCCGTTAACTGTGACGGTTCTGGAAGAAAGAAACATAAATCAAATCTTCAATTGAAAAAAGTTTCGGATCCGGGTATAATGATCATGACCCGTTTACAATTATGGGTCATTCTCTGTTTCATTTCAACGTTGTTGTTGGAAGCCAAAACCTTAGACCCTTATAAGGTTCTTGGGGTTGATAAAAATGCAAGTCAGCGAGAAATTCAGAAGGCTTTCCACAAGCTCTCTCTTCAGTATCACCCTGACAAGAACAAGAACAAGGGTGCACAAGAGAAGTTCTCTCAGATCAATAATGCATATGAGATTTTATCCGATGAGCAGAAGAGGAAGAATTATGACATGTATGGCGATGAGAAAGGAAATCCTGGATTTGAAGCTGGCCATCCTGGATATGAAGGTGGAAATACTTATTTCACTGGTGGTGGACCCGGGGGATGGCAGGGTATGGGTGGGCAGGGAGGCTCCAAGTCATTCTCCTTCTCATTTGGCGGTGGTTCCGGTGGTCAAAATTCTTTTGGATTTGGTTTGGATGATATTTTTGGCAACTTTTTTGGTGGAGGAGGTGGTGGGAGTCGGTTTGGTGGTGGTGGTGGTGGGAGTCGGTTTGGTGGTTTTGGTAGTTCAACTAGTTCTCAATCTAAGTCCAAGAGTTCAACAAAAACTTTTAGAGCCATAAATTCTAATATATACCAGAAAGAAATAGCCGATCGAGGGATGACTTGGCTTGTGTTATGTTATACACACTCATCGAAGGGGATCCAATACTTTGAATCCACTGTAGAGGAGGTTGCTAATTCATTGCAAGGAGCTTTAAAGGTAGGAAGCGTTAATTGTGAAAAAGAAGCCTCGTTCTGTAAGGAGCTTGGTGTATATCCGGGCAGAAGTCCGAGGCTTTTTGCTTATTCTTACAAGGAGAACGGAAAGGGCTCTTTAGTGGAATATGATGGCAACTTGGCTGTTAAGGATTTGAAGGCTTTTTGTCTAGAAAACTTGCCAAGGTTTTCAAAACGGACCGACCTGAATTCTCTAGATCAATTTAGCACTACTGGAAAGTTGCCGAGGGTGATGCTTCTCTCAACCAAGAAGAACACTCCTGTAATCTGGCGTGTTCTTAGTGGCCTGTATCACAAACGCTTTACTTTCATTGATGCAGAGGTTCATGATGTTTCTGATCCGAAAACGAAAAAGCTAGGAGTTGATGCACTTCCAGCTATGGTAGGTTGGACACCTAATGGAGAGAAGCATATTCTGAAAACAGGAATTTCTGTAAAAGATATAAAGTCTGCAGTTTCTGACCTTAGTAATGTACTTGATAATTTTGACAAAACTAGTAAAAAAGAAGCATCAGGTCAAGCCAAGAAGGAACAAACAGACCCAGATGATGGACCAATACAGTTGCTTTCACAGTCTAACTTTGAGGTTCTTTGTGGTCAGAAAACTCCACTCTGCATAATTGGTGCCTTCAGATCTTCTAAAGCTAGAGAAAACCTACTTTCTGTTCTCTCTGTGGTATCTAAAAAGTCATTATCAAGAAGACCAAATCATGGAACTAGTTCAAGGGACTCTATATCCTATGCTCTCTTAGATGCTGCAAATCAACAATCATTTCTAAATGGATTGAACAAAAAAGGGTATAAATCATCAGAAAAGTTGTTGATTGCATATAAGCCTAAAAGAAGAAAGTACAGTGTATTCAGAGGTGAAATGGCAATAGAGGAAGTAGAGAGTTTCATTAGTTCAGTTCTGAGTGGAGATGTAGAATTCAGTGAAACACATGAGAAGAAGCCTTTACTCAAATAG 1809 0.4052 MKDSVNCDGSGRKKHKSNLQLKKVSDPGIMIMTRLQLWVILCFISTLLLEAKTLDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKNKGAQEKFSQINNAYEILSDEQKRKNYDMYGDEKGNPGFEAGHPGYEGGNTYFTGGGPGGWQGMGGQGGSKSFSFSFGGGSGGQNSFGFGLDDIFGNFFGGGGGGSRFGGGGGGSRFGGFGSSTSSQSKSKSSTKTFRAINSNIYQKEIADRGMTWLVLCYTHSSKGIQYFESTVEEVANSLQGALKVGSVNCEKEASFCKELGVYPGRSPRLFAYSYKENGKGSLVEYDGNLAVKDLKAFCLENLPRFSKRTDLNSLDQFSTTGKLPRVMLLSTKKNTPVIWRVLSGLYHKRFTFIDAEVHDVSDPKTKKLGVDALPAMVGWTPNGEKHILKTGISVKDIKSAVSDLSNVLDNFDKTSKKEASGQAKKEQTDPDDGPIQLLSQSNFEVLCGQKTPLCIIGAFRSSKARENLLSVLSVVSKKSLSRRPNHGTSSRDSISYALLDAANQQSFLNGLNKKGYKSSEKLLIAYKPKRRKYSVFRGEMAIEEVESFISSVLSGDVEFSETHEKKPLLK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1932 602 Coils Coil 89 109 - -
Lal2g1932 602 SMART dnaj_3 54 111 IPR001623 -
Lal2g1932 602 CDD PDI_a_family 228 329 - -
Lal2g1932 602 ProSiteProfiles dnaJ domain profile. 55 119 IPR001623 -
Lal2g1932 602 Gene3D Glutaredoxin 225 335 - -
Lal2g1932 602 Gene3D DnaJ domain 52 197 IPR036869 -
Lal2g1932 602 MobiDBLite consensus disorder prediction 447 466 - -
Lal2g1932 602 PANTHER DNAJ PROTEIN ERDJ3A 33 600 - -
Lal2g1932 602 PRINTS DnaJ domain signature 57 75 IPR001623 -
Lal2g1932 602 PRINTS DnaJ domain signature 75 90 IPR001623 -
Lal2g1932 602 PRINTS DnaJ domain signature 91 111 IPR001623 -
Lal2g1932 602 PRINTS DnaJ domain signature 111 130 IPR001623 -
Lal2g1932 602 SUPERFAMILY Thioredoxin-like 224 334 IPR036249 -
Lal2g1932 602 CDD DnaJ 55 108 IPR001623 -
Lal2g1932 602 PANTHER DNAJ PROTEIN ERDJ3A 33 600 - -
Lal2g1932 602 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Lal2g1932 602 SUPERFAMILY Chaperone J-domain 51 155 IPR036869 -
Lal2g1932 602 Pfam Thioredoxin-like domain 221 330 - -
Lal2g1932 602 MobiDBLite consensus disorder prediction 447 463 - -
Lal2g1932 602 Pfam DnaJ domain 55 116 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1932 Lal-Chr2 21528789 21533286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1932 57 118 C2H2 Transcription Factor Family AT1G74250 41.176 8.40e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1932 - - twl:120013334 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1932 2 21528789 21533286 Lal2g1932 2 21528789 21533286 ECH