Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1925 ATGGGTTCTCAACAACAAAACTTGCAAGAGCCATGGCTTTTGGAGAATGGTGGAAACAATATCAAAGGTTTGAGCAGAGAAATGAGGCATGGAAGAACAGCACATAACATGTCAACATCTTCATTGAGAAAGAAATCTAGTCTTACTCTTGTTTCAAAGATTCCATTTGATTGGTTAAGACAAATTTTTGTTAGCTTTCAAGAAGTTATTCTTGGTACAAAGCTTTCCATTTTGTTCATTGCAGTTCCTCTTGCAATCTTTGCTGAATTATATGGCCTTGGAAGGCCCTGGATTTTTCTATTTAGCTTATTAGGGCTTACACCTCTTGCTGAACGTGTCAGCTTCCTCACAGAACAAATTGCTTATTACACTGGTCCCACAGTGGGAGGACTTCTGAATGCAACATGTGGGAATGTTACTGAGCTGATTATAGCAATATTTGCCCTTACTAGTGGCCAAGTTGCTGTAGTGAAGTATTCTCTCTTAGGTTCCATCCTTTCAAACCTTCTACTAGTTCTTGGAACCTCTCTATTCTGTGGTGGTATTAAAAACATGAATGTGGAACAAAAATATGACAGAAGACAAGCAGATGTGAACTCCCTTATGCTACTATTAGCATTGTTGTGCCACTTGCTTCCATTGCTTTTCAGATATAGCGGCCCGCCGATCGCACTCACCGATGTTTCATCGTTGCAATTGTCAAGAGCTGCTGCCATTGTTATGTTGCTTTCATATTTTGCTTACCTTGTTTTTCAACTGTTTACACACAGGCAGTTATTTGAGACTGAAGAGGCTGAAGGTGATGAGAATGACTCAGAAGAAGAACCTGCAATTGGATTATGGAGTGGAGTTGTTTGGCTAGTTCTGATGACTTTAATCATTGCTTTGTTGTCTGAATTTGTTGTGGCCACAATTGAGGCTGCATCAGATTCATGGGGTCTATCTGTCAGCTTCCTCAGCATAATCTTACTTCCAATAGTTGGAAATGCAGCTGAACATGCAGGAGCTATCATTTTTGCTTTTAAGAACAAGCTGGATATTTCATTGGGTGTAGCATTGGGATCTTCAACTCAAATTGCCATGTTTGCTGTTCCTGTATGTGTGATTGTTGCATGGATAGCAAATATCCAAATGGACCTGAACTTCAATGTATTAGAGACAGGTTCTCTTGCTGTGGCAATAATAACCACAGCTTTCACTTTGCAGGATGGTACATCTAACTACCTGAAAGGGTTGATTCTCCTGCTATGCTACATTGTTATTGCTGCTTGCTTCTTTGTACAAACTTCACCATCCCTTAACCATGCTGGTGTTACTAACAACACCCTTCAATCAGCAACTGGTGCAGTTTTAAGTGCTCAGTAG 1365 0.4022 MGSQQQNLQEPWLLENGGNNIKGLSREMRHGRTAHNMSTSSLRKKSSLTLVSKIPFDWLRQIFVSFQEVILGTKLSILFIAVPLAIFAELYGLGRPWIFLFSLLGLTPLAERVSFLTEQIAYYTGPTVGGLLNATCGNVTELIIAIFALTSGQVAVVKYSLLGSILSNLLLVLGTSLFCGGIKNMNVEQKYDRRQADVNSLMLLLALLCHLLPLLFRYSGPPIALTDVSSLQLSRAAAIVMLLSYFAYLVFQLFTHRQLFETEEAEGDENDSEEEPAIGLWSGVVWLVLMTLIIALLSEFVVATIEAASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSSTQIAMFAVPVCVIVAWIANIQMDLNFNVLETGSLAVAIITTAFTLQDGTSNYLKGLILLLCYIVIAACFFVQTSPSLNHAGVTNNTLQSATGAVLSAQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1925 454 TIGRFAM cax: calcium/proton exchanger 78 426 IPR004798 GO:0006816|GO:0015369
Lal2g1925 454 Gene3D - 126 264 IPR044880 -
Lal2g1925 454 Gene3D - 271 427 IPR044880 -
Lal2g1925 454 TIGRFAM caca2: calcium/proton exchanger 62 426 - -
Lal2g1925 454 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 9 435 IPR004713 GO:0006812|GO:0008324|GO:0016021
Lal2g1925 454 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 9 435 - -
Lal2g1925 454 Pfam Sodium/calcium exchanger protein 283 424 IPR004837 GO:0016021|GO:0055085
Lal2g1925 454 Pfam Sodium/calcium exchanger protein 97 253 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1925 Lal-Chr2 21470393 21475217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1925 10 431 Antiporters AT2G38170 68.445 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1925 K07300 - gmx:100816231 618.616