Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1922 ATGGGAGTGGACTACTACAAAATTCTGGAAGTAGAGAGAGGAGCAAGTGATGATGAACTAAAGAAAGCATATAGAAAGCTTGCTATGAAGTGGCATCCTGATAAGAACCCTAACAACAACAAAGATGCTGAAACCAATTTCAAGCAAATTTCTCAAGCTTATGATGTTTTGAGTGATCCACAAAAGCGAGCAGTGTATGATCAGTATGGTGAGGAGGGGCTGATGGGGCAGGTGCCACCACCGGGTGCTGGTGGTTTTTCGGGTGGGAGCAATGGCGGTCAGACGTCATTCAGGTACAACACCAGGAGTGCAGATGATATATTTTCGGAGTTTTTCGGGTTTTCGAGTCCCTTTGGTGGAATGGGAGATATGGGTGGCCGTGCTGGTCCCTCTGGCTTTTCTCGGGGAGGCATGTTCGGGGATGATATCTTTGCTCAACTTAGGGGTAGTGCTGGAGATGGCTCTGGACATGCGCCTAGGAAAGGTGCAGCCATAGAGAGAACATTGCTATGTAGTTTGGAAGATTTGTATAAAGGGACTACTAAGAAAATGAAGATTTCAAGGGATGTTATTGATGCCAATGGGAGGCCTAGCACAGTAGATGAAATTCTTTCAATCCAGATCAAACCAGGTTGGAAGAAGGGAACAAAAATAACTTTTCCAGAGAAGGGAAATGAACATAGAGGAGTTATACCTGCAGACCTTGTCTTCCTTATTGACGATAAGCCTCACAGTGTCTTCAAGAGGGATGGTAATGATCTTGTTGTCATGCAAAACATATCTCTCGTAGAAGCCCTGACAGGTTATGTGGCGCAACTGACAACCCTTGATGGGCGGAATCTTACCATTCTCGTCAATTCCATCATTAGTCCAACATACGAAGAAATTGTTAAAGGGGAGGGTATGCCCATACCCAAAGATCCTTCGAAGAAGGGTAATTTGAGGATCAAGTTCGATATCAAGTTTCCCTCCAGACTTACGTCAGAGCAGAAAGGCGGCATTAAGCGATTGTTGACTTCTCTCTAA 1026 0.4483 MGVDYYKILEVERGASDDELKKAYRKLAMKWHPDKNPNNNKDAETNFKQISQAYDVLSDPQKRAVYDQYGEEGLMGQVPPPGAGGFSGGSNGGQTSFRYNTRSADDIFSEFFGFSSPFGGMGDMGGRAGPSGFSRGGMFGDDIFAQLRGSAGDGSGHAPRKGAAIERTLLCSLEDLYKGTTKKMKISRDVIDANGRPSTVDEILSIQIKPGWKKGTKITFPEKGNEHRGVIPADLVFLIDDKPHSVFKRDGNDLVVMQNISLVEALTGYVAQLTTLDGRNLTILVNSIISPTYEEIVKGEGMPIPKDPSKKGNLRIKFDIKFPSRLTSEQKGGIKRLLTSL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1922 341 Gene3D - 163 242 - -
Lal2g1922 341 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lal2g1922 341 SUPERFAMILY Chaperone J-domain 3 96 IPR036869 -
Lal2g1922 341 CDD DnaJ 4 59 IPR001623 -
Lal2g1922 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 166 244 IPR008971 GO:0006457|GO:0051082
Lal2g1922 341 Pfam DnaJ C terminal domain 165 323 IPR002939 -
Lal2g1922 341 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lal2g1922 341 MobiDBLite consensus disorder prediction 78 98 - -
Lal2g1922 341 CDD DnaJ_C 165 326 - -
Lal2g1922 341 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lal2g1922 341 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lal2g1922 341 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lal2g1922 341 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lal2g1922 341 SMART dnaj_3 3 62 IPR001623 -
Lal2g1922 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 246 332 IPR008971 GO:0006457|GO:0051082
Lal2g1922 341 Pfam DnaJ domain 4 67 IPR001623 -
Lal2g1922 341 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 - -
Lal2g1922 341 Gene3D - 244 324 - -
Lal2g1922 341 Gene3D DnaJ domain 3 122 IPR036869 -
Lal2g1922 341 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1922 Lal-Chr2 21433746 21436572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1922 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 2.32e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1922 K09510 - gmx:100818358 528.865