Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1913 ATGATTGGCAATTTCTTTGGTGCCTTGACTTGTTGTAAAGGGAAGGACATTCTTGTTGACCAGCCACATGAAAATGTGATTGCAACTAAAACATATAGCTATAACTCATTGAGATCAGCAACTGGAGATTTTCACCCTTCAACGAAAATTGGTGGAGGAGGTTATGGAGTTGTCCACAAGGGAGTTTTAAGGGATGGTACTCAAGTTGCCATCAAGTCTCTTTCTGTAGATTCTAAACAAGGATGCCATCAATTCATGACAGAAATTGATATGATATCAAGGACAAGGCATCCAAATCTAGTGGAACTAATTGGCTTATGTATTGAGGGTAGTCATCAAATATTGGTGTATGAATATCTGGAGAACAATAGCCTTTCGAGTTCCTTGCTTGGTTCCAAAAGTAAATATGTTCCTCTGGATTGGCCAAAGAGAGCTGCTATTTGCCTTGGTACAGCTTCTGGTCTTAGGTTTCTCCATGAAGAAGCGCAACCAAGAATCGTTCACAGAGATATCAAGGCCAGCAACATACTGTTGGATGGGAACTTTAATCCTAAAATTGGTGATTTTGGTCTCGCAAAACTGTTTCCTGACAATATCACCCATGTTAGTACTCGAGTTGCAGGAACGGAAGGATATCTTGCACCAGAATATGCACTTCTAGGACAACTTACAAAGAAGGCAGATGTATATAGTTTTGGGGTTCTCATGCTTGAAATAATCAGTGGTAAAAGTAGTAGCAAAGCAGCATTTGGAGAGAATCTTTTGGTTCTAGTGGAATGGGCATGGAAGCTGAAAGAAGAAAAAAGGCTTATGGACCTTGTTGATCCAAAACTAACGAACTACAATGAGATTGAGGTGTATAGGTTCATTATGGTTGCTCTATTTTGCACCCAAGCAGCTTCTCAGCATAGACCAAACATGAAGCAAGTATTGAAAATGCTTTCCAAGGCAGTTCATATTAATGAGAAGGCATTGACTGAGCCTGGAATATACAGATTGCATTCCTCTGGAAAGATGGGCACTTCTTTGAATGATTCATCATCATCTTCTCAAGTAATAAAGCATAAATGTAAAAATCCATATGCAACATCATCCAACTTTCCGACTAAGGAGATTAAACCAAATGGAGATTCTTCCAATTTTCAGAGGAAGATGTCGGCCAAGAAAAACTATAGGTGA 1179 0.3927 MIGNFFGALTCCKGKDILVDQPHENVIATKTYSYNSLRSATGDFHPSTKIGGGGYGVVHKGVLRDGTQVAIKSLSVDSKQGCHQFMTEIDMISRTRHPNLVELIGLCIEGSHQILVYEYLENNSLSSSLLGSKSKYVPLDWPKRAAICLGTASGLRFLHEEAQPRIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNITHVSTRVAGTEGYLAPEYALLGQLTKKADVYSFGVLMLEIISGKSSSKAAFGENLLVLVEWAWKLKEEKRLMDLVDPKLTNYNEIEVYRFIMVALFCTQAASQHRPNMKQVLKMLSKAVHINEKALTEPGIYRLHSSGKMGTSLNDSSSSSQVIKHKCKNPYATSSNFPTKEIKPNGDSSNFQRKMSAKKNYR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1913 392 ProSiteProfiles Protein kinase domain profile. 44 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1913 392 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Lal2g1913 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Lal2g1913 392 SMART serkin_6 44 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1913 392 Pfam Protein tyrosine and serine/threonine kinase 47 314 IPR001245 GO:0004672|GO:0006468
Lal2g1913 392 Gene3D Phosphorylase Kinase; domain 1 17 119 - -
Lal2g1913 392 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 354 - -
Lal2g1913 392 SUPERFAMILY Protein kinase-like (PK-like) 25 314 IPR011009 -
Lal2g1913 392 Gene3D Transferase(Phosphotransferase) domain 1 120 329 - -
Lal2g1913 392 CDD STKc_IRAK 50 316 - -
Lal2g1913 392 MobiDBLite consensus disorder prediction 359 392 - -
Lal2g1913 392 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1913 Lal-Chr2 21350169 21352823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1913 31 372 Receptor kinase-like Gene Family AT1G56120 49.415 1.16e-103 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal2g1913 PK_Tyr_Ser-Thr 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1913 - - lang:109352637 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1913 2 21350169 21352823 Lal2g1913 2 21350169 21352823 ECH
Lal2g1913 2 21350169 21352823 Lal9g1654 9 18884248 18889887 LSH