Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1861 ATGGAGCAACATAAGATTACAACGTTAGTATTCACAAATGTTGTACTCTTGCTATCATGTGCCATGGCCGCACCGCGGTGTGCAAATTGTGGCCCAAACCCGGTTCCATATCCATTAAGCACTGGACCCGAATGTGGAGACCCATGGTACAAGATCCGATGTACCATGGGTACACTATGGTTTGATGTACTTGCTGGATCGTCATACATGATCCGGTCTATTGATTTGACTTCACGTAGGATTATAATCCGACCCGCTACACTCGAGAGAGGCGTGTGCATGTCTACCGACTTCCACAGCGAAGGCATCCACCTGAATGAGACCCTTCCTTTTAGCATAGGTGCAGGCAATACCATCTTTCAGTTCAACTGTACACCGAACGCGCCACACGCGCCACCTCTGATGAACTGCACAACAAGTAGCTTGTGCCACAGATACATTTCGGATAACCCCGAAGTTGGCGCGTGCGGGCGCGTGAGCACTTGCTGCGAGTACAGGACCGGTGGGGTGCGGAAGGAGTATATGATTGGGGTTCATGGCGGAGGGTGTGCTGCTTATCAGAGTTTTGTGGATTACAATGGTACGGTGGCGCCGCTGGGGAAACGGTGGCCGGAGCCAGGGATAGCGGTAGAGTGGGTGGCACCACTGGAACCAATATGTAAGGGAGCAATGGATTGTAAGGAAGTGGTGAACTCAGAATGTGTAGTGGGTCCCACAAGTGGTGGGGTGAAAAGGTGCATATGCAATGCTACATTCAAATGGGACCCTATAAATGGATTGTGTCAACCTTTAACTCAAAATACAAAGTGCTCAGGACATAGAAAAGACAAACACTGCAAAGTTAAGAAAAAGAAGAAAATGCTTATGGCAGCAGTGGCTGCTTCTTTGGGAGTTATAATCTCAATTGGAATAATAGTTGGAGTACTTTTCTATAAGAAGCATAATGATCAATTGAAGAAGCAAACACAGAATACAAAAATGAAAAAAAAGATGAAAGAAATCTCAAATACCAAAGCTAATAATGCTTTATCATCAAGGATCTTCAATAGCAAGGAAATAAAGAAAGCAACCAACAATTTCTCTCAGGAAAATCTCCTTGGATCAGGTGCATTTGGCGAAGTGTTCAAAGGTACTTTCGATGATGGATCAATCATCGCGATCAAGCGCGCCAAACTCGGAAACACCAAAGGCATTGATCAGATACAAAACGAGGTTCGAATACTATGCCAAGTGAACCATAGAAGCCTAGTGAGACTCCTTGGTTGTTGTTTGGAACTTGAACACCCTTTGCTAATTTATGAGTATGTTGCCAATGGGACACTTTTCGAGTACCTTCATCGGATACCTTCGGACACAAGGCAACCCCTAAAATGGCATAATAGACTCAAAATTGCACACCAAACAGCTGAAGGGCTTTCATATCTTCATTCTGCTGCTGTGCCTCCAATTTACCACCGCGACGTGAAATCGAGCAATATTCTTCTAGATGAAAAACTCGATGCAAAAGTTTCCGACTTTGGCCTATCTAGACTTGTCGAGTTAGCCGAAGAGAACAAGAGCCATATCCTTACTAGTGCACAAGGAACACTTGGCTATCTTGACCCTGAGTACTATAGGAGCTTTCAATTAACAGATAAGAGTGATGTTTATAGCTTCGGAGTCGTGTTAATGGAGCTACTCACAGCACAAAAAGCTATTGATTTCAATAGAGAACAAGAGAATGTTAACTTAGCAGTATATGGTAAGAAGAAAATGATTGAAGAAAAGTTTATGGATTTGATTGATCCATTGCTCAAAGAAGGAGTTAACAATTTAGAATTGGATACAATGAAATCATTGGGTTATCTTGCAGCTGCATGTTTGGATGAACAGAGGCAAAAAAGGCCTTCAATGAAAGAAGTTTCAAATGAGATTGAGTACTTAATTAACATTGTTAAAGGTGGAGAAGGCTCATCTAAACTGAGTTTTTCTATAAAGTGA 1980 0.4288 MEQHKITTLVFTNVVLLLSCAMAAPRCANCGPNPVPYPLSTGPECGDPWYKIRCTMGTLWFDVLAGSSYMIRSIDLTSRRIIIRPATLERGVCMSTDFHSEGIHLNETLPFSIGAGNTIFQFNCTPNAPHAPPLMNCTTSSLCHRYISDNPEVGACGRVSTCCEYRTGGVRKEYMIGVHGGGCAAYQSFVDYNGTVAPLGKRWPEPGIAVEWVAPLEPICKGAMDCKEVVNSECVVGPTSGGVKRCICNATFKWDPINGLCQPLTQNTKCSGHRKDKHCKVKKKKKMLMAAVAASLGVIISIGIIVGVLFYKKHNDQLKKQTQNTKMKKKMKEISNTKANNALSSRIFNSKEIKKATNNFSQENLLGSGAFGEVFKGTFDDGSIIAIKRAKLGNTKGIDQIQNEVRILCQVNHRSLVRLLGCCLELEHPLLIYEYVANGTLFEYLHRIPSDTRQPLKWHNRLKIAHQTAEGLSYLHSAAVPPIYHRDVKSSNILLDEKLDAKVSDFGLSRLVELAEENKSHILTSAQGTLGYLDPEYYRSFQLTDKSDVYSFGVVLMELLTAQKAIDFNREQENVNLAVYGKKKMIEEKFMDLIDPLLKEGVNNLELDTMKSLGYLAAACLDEQRQKRPSMKEVSNEIEYLINIVKGGEGSSKLSFSIK 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1861 659 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 16 647 - -
Lal2g1861 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Lal2g1861 659 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 647 IPR045274 GO:0007166
Lal2g1861 659 SUPERFAMILY Protein kinase-like (PK-like) 343 638 IPR011009 -
Lal2g1861 659 Gene3D Phosphorylase Kinase; domain 1 316 435 - -
Lal2g1861 659 SMART serkin_6 360 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1861 659 Pfam Protein kinase domain 361 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1861 659 CDD STKc_IRAK 366 639 - -
Lal2g1861 659 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Lal2g1861 659 Gene3D Transferase(Phosphotransferase) domain 1 436 648 - -
Lal2g1861 659 ProSiteProfiles Protein kinase domain profile. 360 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1861 659 Pfam Wall-associated receptor kinase galacturonan-binding 28 83 IPR025287 GO:0030247
Lal2g1861 659 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1861 Lal-Chr2 20915674 20920007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1861 25 645 Receptor kinase-like Gene Family AT5G02070 55.662 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal2g1861 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1861 - - aprc:113862410 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1861 2 20915674 20920007 Lal2g1861 2 20915674 20920007 ECH