Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1850 ATGAGGAGAGGTGAAATGAAGTTAGATGAAGATTTAGGTCCTGATCGTGAAGATGATTTCCAAACAGATGATGAAGAAAACCAAGCTCATAGGGACTTTGAACATTTGGGTGATGATTCTGAGTCAGAAAATAATTCACCTCCTTCTACAAATTTATCTGATGATGACTTTCCCATTAATCCTTCATGGCCTCAAAGCTATAGGCAATCTATGGATTTGTTAACTAGTGTAACACCACCAGGAGTAACTTTCCTAAGGAGAAATGCTTCAAAAGGGAGAAGTGATTCTTTCTTCAAGAGACCTGAGACATGGCAAGATGATGATTCTTCTTTGAGTAAACCTTTTGTTTCTGAAACAATTTCATTCAAAGAAGTGGAACCTACATCAAAACCACATGCACAATCATTTGTATCTAGTTGTTCAAGATTTTCTACTCTTGAATTGCCACCTCCAAAGCAAGGATGTTCATTTGCACAATCAGTCATTAATGGGACCAATATGTTATGTGGGATAGGAATACTCACAATTCCATATGCTGTAAAACAAGGAGGGTGGATGAGCCTAATTATACTTGTAATCTTTTCTATAATTTGCTGTTATACTGGGATTTTGTTGAAGAAGTGTTTAGAAAACTACCCTGCACTCAAAACTTTCCCGGACATTGGCCAGGCTGCTTTTGGAATTGCCGGTCGAGCTTCTTGTGTTGAGTATATAACACTGATGAGTGATAATCTCTCATCACTATTTCCTAATGCCAGTGCTCGATTTGGCGGGATTGACATCGGAACTCATCAAACTTTTGCAATCACAGCAGCTATTCTTATTCTGCCGACAGTTTGGCTTAAAAATTTAAGCTTACTCTCTTATGTTTCAGTTGGAGGAATAATCTCAACAATATTGGTCACAGTTTGCTTGTTTTGGGTTGGAATAATAGACCAAGTTGGATATAAGCCAGGAGCAAAAATTTTAGACCTGGCAAACCTATCTGTCTCGGTTGGTCTCTACGGTTTCGGCTTTGCTGGCCATGCAGTTTTTCCTAATATCTACTCTTCCATGAAGGAACCAGCAAAATTCCATTTAGTTTTATATGTCAGCTTTGCTTTTTGTATTTTTATGTACATGGGAGTAGCTATAGTTGGCTATTCAACATTCGGCGACGCGATTGAATCTCAGTTTACCTTAAACATGCCTAAGGAATTATATGCATCCAAGATAGCAACCTGGACAACTGTTGTGACCCCGTTGGCGAAATACGCCTTAACGATATTACCGATTGCGCTGAGCATAGAGGAACTTGCCCCTACTCCTGCACTAAGATGTCATGCTACGTCTGTCGTTGTTAGATCGATTTTAGTGATTTCAAGTTTGGTTGTGGCCCTTTCTGTTCCATATTTTGGTTCTTTGATGGCACTAATTGGTTCTTTTATGTCAATGCTAGTTTTCAAGACGTGGTGCATCACTTGTGACTCTACACTCTTCTCATACCCCGGTGGTTGGAGGCTCCCCGGTCGCACTCTGGTCCAACAAGTGGTATCAGAGCCGATTGTTTGGTTGGTACATGGTGAACTTAAGGAGCTAACACATGCAAAACATGCTAGAGTAACAAGACATTACAAGTTTAATATCAAATTGCAAAATGTCACTAGACTTTGCCAAACAAAGAGCATTGTAACTGTCAATGGACAATTTCCAGGTCCTAGAGTCATAGCAAGAGAAGGCGATCGACTCGTAATTAAAGTGGTTAACCATGTTCAGTACAATGTTTCCATTCATTGGCATGGAATTCGACAACTGAAAAGCGGTTGGGCAGATGGACCTGCATATATCACACAATGTCCAATTCAGACAGGCCAAAGTTATGTGTACAATTTCACAGTCATAGGCCAAAGAGGAACATTGTGGTGGCATGCACATATTTCTTGGCTTAGAGCAACACTTTATGGTCCTATTGTAATACTTCCAAAAAGACATGTCCCTTATCCATTCCCCCAACCACACAAAGAAGTCCCTATCACATTAGGGGAATGGTGGAAAGCCGACACAGAATCGGTTATAAACCAAGCAACACAGACAGGTTTGGCACCAAATAACTCAGATGCTCACACTATCAATGGTCTTCCAGGTCTTCTCTACAACTGCTCTGCCAAAGATACCTTCAAGCTTAAGGTGAAGCCGGGAAAGACGTACCTGCTTCGTCTGATCAATGCTGCACTTAATGATGAGATTTTCTTTAGCATTGCCAATCACACCCTCATTGTGGTTGAAGCTGATGCTGTGTATGTAAAGCCTTTCAGAACGAACATCGTTCTGATCACACCTGGTCAAACCACTAATGTTCTTCTGAAGACCAAGTCCAAGGCTCCAAATGCCACCTTTGTCATAGCTGCAAGGCCTTTTGCTACTGGTCCAGCCACTTTTGACAATACCACAACCACCGGCTTGCTCGAGTACAAGACAACTTCATCACTAACAAACACTAAATCAAATAAAAAACTTCCCCTCCTTAGACCGGTGCTTCCGAAATTCAATGACACAGTCTTTGCAGCTAATTTCAACAATAGAGTCCGTAGCTTGGCCAACGCGAAATACCCAGCCAATGTTCCGAAAACCGTTGATAGGCACTTCTTCTTCACAGTTGGCTTAGGACTTAGTACATGCTCAAAAAACCAATCATGCCAAGGGCCTAATAACACAAGGGTAGCAGCTGCAATAAACAATGTGTCATTTGTGATGCCTAACATTGCATTACTCCAATCACATTTCTTCAACAAATCCAAAGGAGTTTACACTACTGATTTCCCTGCAAACCCTCCCTTCAAATTCAACTACACTGGCACTCCACCTAGCAACATTATGGTAACAAGTGGAACTAAGCTAATAGTGTTACCTTTCAATACAAGTGTTGAGGTTGTACTTCAAGACACTAGCATTATTGGAGCTGAAAGTCATCCACTTCACCTTCATGGATTTAACTTCTTTATTGTGGGACAAGGGGTAGGAAACTTTGACCCTAAGAAAGACCCTTCAAAGTTCAATCTTGTTGATCCTGCTGAGAGGAACACTGCTAGTGTTCCTTCTGGAGGGTGGGTTGCTATTCATTTCATTGCAGATAACCCAGGAGTTTGGTTTATGCATTGCCACCTTGAAGTACATACAAGTTGGGGTCTGAAAATGGCATGGATAGTCCAAGATGGAAAACAGCACAATCAGAAGCTTCCACCTCCACCCTTTGATCTTCCCAAATGTTAA 3249 0.4118 MRRGEMKLDEDLGPDREDDFQTDDEENQAHRDFEHLGDDSESENNSPPSTNLSDDDFPINPSWPQSYRQSMDLLTSVTPPGVTFLRRNASKGRSDSFFKRPETWQDDDSSLSKPFVSETISFKEVEPTSKPHAQSFVSSCSRFSTLELPPPKQGCSFAQSVINGTNMLCGIGILTIPYAVKQGGWMSLIILVIFSIICCYTGILLKKCLENYPALKTFPDIGQAAFGIAGRASCVEYITLMSDNLSSLFPNASARFGGIDIGTHQTFAITAAILILPTVWLKNLSLLSYVSVGGIISTILVTVCLFWVGIIDQVGYKPGAKILDLANLSVSVGLYGFGFAGHAVFPNIYSSMKEPAKFHLVLYVSFAFCIFMYMGVAIVGYSTFGDAIESQFTLNMPKELYASKIATWTTVVTPLAKYALTILPIALSIEELAPTPALRCHATSVVVRSILVISSLVVALSVPYFGSLMALIGSFMSMLVFKTWCITCDSTLFSYPGGWRLPGRTLVQQVVSEPIVWLVHGELKELTHAKHARVTRHYKFNIKLQNVTRLCQTKSIVTVNGQFPGPRVIAREGDRLVIKVVNHVQYNVSIHWHGIRQLKSGWADGPAYITQCPIQTGQSYVYNFTVIGQRGTLWWHAHISWLRATLYGPIVILPKRHVPYPFPQPHKEVPITLGEWWKADTESVINQATQTGLAPNNSDAHTINGLPGLLYNCSAKDTFKLKVKPGKTYLLRLINAALNDEIFFSIANHTLIVVEADAVYVKPFRTNIVLITPGQTTNVLLKTKSKAPNATFVIAARPFATGPATFDNTTTTGLLEYKTTSSLTNTKSNKKLPLLRPVLPKFNDTVFAANFNNRVRSLANAKYPANVPKTVDRHFFFTVGLGLSTCSKNQSCQGPNNTRVAAAINNVSFVMPNIALLQSHFFNKSKGVYTTDFPANPPFKFNYTGTPPSNIMVTSGTKLIVLPFNTSVEVVLQDTSIIGAESHPLHLHGFNFFIVGQGVGNFDPKKDPSKFNLVDPAERNTASVPSGGWVAIHFIADNPGVWFMHCHLEVHTSWGLKMAWIVQDGKQHNQKLPPPPFDLPKC 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1850 1082 MobiDBLite consensus disorder prediction 23 41 - -
Lal2g1850 1082 TIGRFAM laccase: laccase 535 1082 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lal2g1850 1082 PANTHER MULTI-COPPER OXIDASE 527 1082 IPR045087 -
Lal2g1850 1082 Pfam Transmembrane amino acid transporter protein 156 479 IPR013057 -
Lal2g1850 1082 Pfam Multicopper oxidase 933 1065 IPR011706 GO:0005507|GO:0016491
Lal2g1850 1082 MobiDBLite consensus disorder prediction 42 65 - -
Lal2g1850 1082 MobiDBLite consensus disorder prediction 1 65 - -
Lal2g1850 1082 Gene3D - 666 861 IPR008972 -
Lal2g1850 1082 Gene3D - 520 654 IPR008972 -
Lal2g1850 1082 ProSitePatterns Multicopper oxidases signature 1. 1040 1060 IPR033138 -
Lal2g1850 1082 CDD CuRO_2_LCC_plant 669 817 IPR034285 -
Lal2g1850 1082 Gene3D - 885 1082 IPR008972 -
Lal2g1850 1082 SUPERFAMILY Cupredoxins 531 686 IPR008972 -
Lal2g1850 1082 CDD CuRO_3_LCC_plant 928 1065 IPR034289 GO:0005507
Lal2g1850 1082 Pfam Multicopper oxidase 668 818 IPR001117 -
Lal2g1850 1082 ProSitePatterns Multicopper oxidases signature 2. 1045 1056 IPR002355 GO:0005507
Lal2g1850 1082 PANTHER LACCASE-10 527 1082 - -
Lal2g1850 1082 Pfam Multicopper oxidase 543 655 IPR011707 GO:0005507
Lal2g1850 1082 SUPERFAMILY Cupredoxins 864 1082 IPR008972 -
Lal2g1850 1082 SUPERFAMILY Cupredoxins 662 860 IPR008972 -
Lal2g1850 1082 CDD CuRO_1_LCC_plant 538 654 IPR034288 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1850 Lal-Chr2 20810104 20820023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1850 6 480 Amino Acid or Auxin Permease AAAP Family AT5G02180 50.299 1.85e-164 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1850 K05909 - gmx:100811534 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1850 2 20810104 20820023 Lal2g1850 2 20810104 20820023 ECH
Lal2g1850 2 20810104 20820023 Lal1g2186 1 23889674 23892832 LSH