Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1841 ATGGGTGCTTGTTGGAGCAATAGGATTAAGTCTGTGAGTTCTTCCAATACAGGCTTCACTTCTAGAAGTGTAAGCAGGAATGGCTATGATACAACCAGCTCAAACAGCAGGAACTCATCGGCTTCCGTACCTGCCACTCCTCGAAGCGAGGGTGAGATCTTACAGTCTTCCAATCTTAAAAGCTTCAGCTTCAGTAATGTAAGAGCTGCCACGAGAAATTTCCGCCCCGACAGTGTCCTGGGGGAGGGCGGTTTTGGTTCAGTTTTTAAGGGCTGGATCGATGAGCAATCACTTACTGCTACCAAACCAGGAATAGGCATGATTGTCGCTGTTAAGAGACTTAACCAAGATGGTTTCCAGGGTCATAAGGAATGGCTGGCTGAAATCAACTATCTTGGGCAACTACAGCATCCTAATCTGGTCAAGTTGATAGGATTTTGCTTTGAGGATGAGCATCGGCTTCTGTTTAATCCAACTTCACAAGTTCTAATACTAATGTCGCCTGAAATCATCGTTAATGCAGGGGGTTCATTTTTTCAGCCACTATCTTGGAATTTGCGATTGCAAATAGCTCTAGGAGCTGCAAGGGGTCTTGCTTTTCTCCATAGTACAGAACCTAAAGTCATATATCGTGACTTTAAGACTTCAAATATCCTGCTCGATACTAAATACAACGCCAAGCTTTCCGATTTTGGGTTAGCAAGAGATGGGCCAACTGGTGATAAAAGCCATGTCTCTACTAGGGTCATGGGAACCCATGGGTATGCGGCACCAGAGTATCTAGCAACAGGTCATCTCACTGCCAAGAGTGACGTGTACAGTTTCGGAGTAGTTCTTCTCGAAATGATATCAGGAAGACGAGCGATAGACAAGAACCAGCCATCTGGAGAACATAACTTAGTTGAATGGGCCAAACCATACCTATCTAACAAACGTAGAGTTTTTCGTGTAATGGATCCTCGTCTTGAAGGTCAGTATTCCAATAATCGAGCCCAAGTAGCAGCCACCCTTGCTATGCAATGTCTTTCTATGGAGCCTAAGTGCAGGCCGAATATGGACGAGGTGGTAAAGGCATTGGAGCAGCTTCAAGATTCAAAGGACACCCAGAAAAAACGTGCTGACCAGAAAGAGCGCCGTGTGCCTAATTCCGGCTTCGGCCCTTCCAATGGCAACCCAACATCTAGCAAAGGTAGTGCCGATGCTCCCAGAAAGGCTTCTGCTTATCCCAGGCCTTCTACTTCTCTCCTTCGCGGTTGA 1257 0.4614 MGACWSNRIKSVSSSNTGFTSRSVSRNGYDTTSSNSRNSSASVPATPRSEGEILQSSNLKSFSFSNVRAATRNFRPDSVLGEGGFGSVFKGWIDEQSLTATKPGIGMIVAVKRLNQDGFQGHKEWLAEINYLGQLQHPNLVKLIGFCFEDEHRLLFNPTSQVLILMSPEIIVNAGGSFFQPLSWNLRLQIALGAARGLAFLHSTEPKVIYRDFKTSNILLDTKYNAKLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNQPSGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSNNRAQVAATLAMQCLSMEPKCRPNMDEVVKALEQLQDSKDTQKKRADQKERRVPNSGFGPSNGNPTSSKGSADAPRKASAYPRPSTSLLRG 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1841 418 Coils Coil 352 379 - -
Lal2g1841 418 MobiDBLite consensus disorder prediction 382 400 - -
Lal2g1841 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Lal2g1841 418 MobiDBLite consensus disorder prediction 1 53 - -
Lal2g1841 418 MobiDBLite consensus disorder prediction 362 379 - -
Lal2g1841 418 ProSiteProfiles Protein kinase domain profile. 74 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1841 418 Gene3D Transferase(Phosphotransferase) domain 1 173 385 - -
Lal2g1841 418 Gene3D Phosphorylase Kinase; domain 1 49 157 - -
Lal2g1841 418 SUPERFAMILY Protein kinase-like (PK-like) 58 364 IPR011009 -
Lal2g1841 418 PANTHER OS01G0588500 PROTEIN-RELATED 22 399 - -
Lal2g1841 418 Pfam Protein kinase domain 77 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1841 418 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Lal2g1841 418 PANTHER KINASE 1B 22 399 - -
Lal2g1841 418 MobiDBLite consensus disorder prediction 362 418 - -
Lal2g1841 418 MobiDBLite consensus disorder prediction 7 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1841 Lal-Chr2 20734556 20738526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1841 20 359 Glycoside Hydrolase AT3G07070 44.538 1.22e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal2g1841 Pkinase 2.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1841 - - gmx:100819620 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1841 2 20734556 20738526 Lal2g1841 2 20734556 20738526 ECH