Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1840 ATGGCTGAGGTGAAATCAGAGGAGTGTTGTCAAGAGAATAAGCAATCTGCTGCTGCTTCTTGCTCTTCTGTATCTGAAGGCGGCTGCAGTACAATTCACAAGTCTCCAGCTATATATAGTCCAGCACTTATGTCGCCCTCGCATCGGAGGACTACGGGCCCTATAAGGCGTGCAAAGGGAGGGTGGACAGTGCAGGAGGATGAGACATTAAGGAATGCTGTTGCAACTTTTAAAGGAAAGAGTTGGAAGAAAATAGCTGAGTTTTTTCCTGATAGATCAGAAGTTCAGTGTCTGCACAGATGGCAAAAAGTACTGAATCCGGAACTTGTTAAAGGACCATGGACACAAGAGGAGGATGAAAAAATTGTTGAATTGGTGTCAGAACATGGGCCTACAAAATGGTCTTTGATAGCCAAGTCTTTGCCCGGTCGAATAGGGAAGCAGTGCCGAGAAAGGTGGCACAATCATCTTAATCCTGACATAAAGAAGGATGCTTGGACTGTGGAAGAGGAATTGGCATTGATGAATGCTCATAGTATACACGGGAACAGATGGGCTGAAATAGCTAAGGTCCTTCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCTTTGAAGAAAAAGTTGGATTTTTATATAGCTACTGGAAGACTTCCACCAATTTCAAAGAACGATACACAAGTTGTTGTCAAAGATTCAATTAGACGATCTGCTACTAAAACACTACTTGTTTCTTCAAATAAAGAGTTAAATGGAGCTGTTGAAACATCTTCTGAAACTACTACCATTAGTAAATTAGATGACAGAGGCAAGAATCGGTTAGAGTCCTCAGGAATAGTAAGAGAAGTTGGTGATTCTTCAAGTGTTCCTGCAAATGAATCTGCTGATTCGGACTGTGTAGAATGCAATCCTGGATCGTCTAACGTTGATCTCATCTGTGGCGGCTCAGAACCACTCTCCGGAGCTAATTGTGGAGGAACTTGTGGGTCGAAATTTGAGAATTCTGGTGTCAACAGAAACTTAACTATTAAGCATTTTGTAAACAATGGTGAAATGAGCTGTAGCAGGTTAATCAGAACATCTCTTCCGCAAGAAAGTCCATCATGTGGTTCTTTGTGTTATGAGCCACCTTATTTAGATGGTTCAGTTCCTTTAGATTCTCTTTCTCTAAATAACTTATGCTTGCATAATGAGTCAATGTTGTCTCCTATTAGTTTATTTACTCCACCTAGTGTGAAGGGTAGTGAATTATGCAGAGAGTCACCTGAATCAATATTGAAAAAGGCGGCTAATACTTTTCCAAACACTCCTTCCATATTGAGGAGGAGAAGGACTGGAGTCCAATCAGAAACTTCTCCTACTAAAGTTTTGAAACTGGATAATGGTTTGCATGCTTCTAATGAACCGGCGAGAGACAAAGATAATTCTGGTTCTGAAGTTGAGAGGTTTGCCGAGAGTCCAGCAGGCCATGACAATGAAAGTGACATTCCTAATAGTAAGGCGTTCAATGCATCTCCACCATACCGGTTGAGATCGAAGCGAACAGCGGTTATCAAGTGTGTGGAAAAACAACTCGAGTTTGCGTTTGACAAAGAGAAGAACGATCGCAATATCAATGCAATGGAAAAGTCTGCTAAGAGGATCAATGTTATGTCTGAAGATTGTTTGCATGAAACAAAATTGGTAGTGACATAA 1704 0.4114 MAEVKSEECCQENKQSAAASCSSVSEGGCSTIHKSPAIYSPALMSPSHRRTTGPIRRAKGGWTVQEDETLRNAVATFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDEKIVELVSEHGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTVEEELALMNAHSIHGNRWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYIATGRLPPISKNDTQVVVKDSIRRSATKTLLVSSNKELNGAVETSSETTTISKLDDRGKNRLESSGIVREVGDSSSVPANESADSDCVECNPGSSNVDLICGGSEPLSGANCGGTCGSKFENSGVNRNLTIKHFVNNGEMSCSRLIRTSLPQESPSCGSLCYEPPYLDGSVPLDSLSLNNLCLHNESMLSPISLFTPPSVKGSELCRESPESILKKAANTFPNTPSILRRRRTGVQSETSPTKVLKLDNGLHASNEPARDKDNSGSEVERFAESPAGHDNESDIPNSKAFNASPPYRLRSKRTAVIKCVEKQLEFAFDKEKNDRNINAMEKSAKRINVMSEDCLHETKLVVT 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1840 567 MobiDBLite consensus disorder prediction 463 509 - -
Lal2g1840 567 Gene3D - 164 239 - -
Lal2g1840 567 Gene3D - 58 110 - -
Lal2g1840 567 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Lal2g1840 567 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Lal2g1840 567 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Lal2g1840 567 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Lal2g1840 567 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Lal2g1840 567 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Lal2g1840 567 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Lal2g1840 567 CDD SANT 113 157 IPR001005 -
Lal2g1840 567 PANTHER MYB-RELATED PROTEIN B-LIKE 23 479 - -
Lal2g1840 567 PANTHER MYB PROTEIN-RELATED 23 479 - -
Lal2g1840 567 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
Lal2g1840 567 Gene3D - 111 162 - -
Lal2g1840 567 SMART sant 162 210 IPR001005 -
Lal2g1840 567 SMART sant 110 159 IPR001005 -
Lal2g1840 567 SMART sant 58 107 IPR001005 -
Lal2g1840 567 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Lal2g1840 567 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Lal2g1840 567 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Lal2g1840 567 CDD SANT 62 105 IPR001005 -
Lal2g1840 567 CDD SANT 165 208 IPR001005 -
Lal2g1840 567 MobiDBLite consensus disorder prediction 468 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1840 Lal-Chr2 20694931 20700435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1840 2 546 MYB Transcription Factor Family AT3G09370 50.358 3.43e-153 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal2g1840 Myb_DNA-binding 2.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1840 K09422 - gmx:778081 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1840 2 20694931 20700435 Lal2g1840 2 20694931 20700435 ECH