Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1833 ATGCCTTATTCATCATCATCATCATCATATTCATATTCAAACCCTTTTCTTCGCAATCTTCTCCAATGGCACAAGAAGGATTTCACAATCGCCACATTCATATTCACATTCATCATCTTCTTCTTCTATTCTCGCCACAGTAATAATAACAATAACACCATTACTCTCCAAAAACAACAACAACAACCTTTCGCAATAACCACAAGTCTCGTTCCTTTGACTTTACTCCACAAAGCAAAACAAAGAGGCGCATTTTGCTTGGATGGGAGTGTTCCAGGGTACCATTTTCAAAAGGGGTTTGGATCTGGATCTCATAATTGGTTGCTTCACATTGAGGGAGGAGGGTGGTGCAATTCAATAGCTTCATGTTCTCATCGAAAAATGACTCCTTTGGGGTCATCCAAGTATATGGAAACAGAGGTTCTTTTTTCAGGAATATTAAGTTCTGACCCCTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCTTTTGCTGGTCACCCAGAAAGTGAGATTAAGAAAGGAAGTGGGTTGTTCTTCAGAGGCCAGATCATATGGGAAGCTATCATGGATGAACTTTTATCAATTGGCATGTCTAAAGCAAAACAGGCTCTGCTTACAGGATGCTCTGCTGGAGGGTTGGCAACCCTTATACATTGTGATGACTTCCGTGAATTTTTTCCAAAAGAAGCAACTGTCAAGTGTCTTGCTGATGCAGGTTTCTTCCTAGATGAGAAGGATATTCTCGGAAATAGTACAATGAGATCTTTCTATCATGATGTTGTCCAGCTTCAGGGTGTTGTAAAAAGTTTACAGAAAGATTGCATTGCAAAAATGGAACCATTTAAGGCAGAAATTATTAAAAACATTAAGACGCCAGTTTTTCTCGTTCACCCAGCTTACGATTTCTGGCAGATACATAATATTTTGGTACCTCAAGGATCAGATCCCCATGGTCACTGGAAAAGCTGCAGATTGAACCTTCTCAATTGTAATGCTAACGAGATTGGAATACTTCACCATTTCCGTACTTCTTTGCTGAAGGCTGTGGATGAATTCCAGCAACGAGAAGAGATTGGAATGTTTATTGATTCCTGCTTTATTCATTGCCAGACTTTGATGGAAGATACATGGCATTCACCCAATTCTCCTAAAATAAATGATAAGACAATTGCTGCCTCTGTTGCCGATTGGTTTTTCGACCGAGAAGTAGTAAAGCGAATTGACTGCCCTTATCCATGCAACCCCACTTGCCATAATATGGATTTTAGTACCAGAATATAG 1311 0.3966 MPYSSSSSSYSYSNPFLRNLLQWHKKDFTIATFIFTFIIFFFYSRHSNNNNNTITLQKQQQQPFAITTSLVPLTLLHKAKQRGAFCLDGSVPGYHFQKGFGSGSHNWLLHIEGGGWCNSIASCSHRKMTPLGSSKYMETEVLFSGILSSDPSQNPDFFNWNKVKIRYCDGASFAGHPESEIKKGSGLFFRGQIIWEAIMDELLSIGMSKAKQALLTGCSAGGLATLIHCDDFREFFPKEATVKCLADAGFFLDEKDILGNSTMRSFYHDVVQLQGVVKSLQKDCIAKMEPFKAEIIKNIKTPVFLVHPAYDFWQIHNILVPQGSDPHGHWKSCRLNLLNCNANEIGILHHFRTSLLKAVDEFQQREEIGMFIDSCFIHCQTLMEDTWHSPNSPKINDKTIAASVADWFFDREVVKRIDCPYPCNPTCHNMDFSTRI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1833 436 Pfam Pectinacetylesterase 68 413 IPR004963 GO:0016787
Lal2g1833 436 PANTHER PECTIN ACETYLESTERASE 4 23 428 - -
Lal2g1833 436 PANTHER NOTUM-RELATED 23 428 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1833 Lal-Chr2 20631806 20640164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1833 22 399 Carbohydrate Esterase AT3G09410 59.424 8.49e-175 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1833 K19882 - gmx:100792819 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1833 2 20631806 20640164 Lal2g1833 2 20631806 20640164 ECH