Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1832 ATGTCTCCAACAGGTTCTTCAAGATGGAGTCCTACCACTGAACAACTCATGATCTTAGAGGAACTGTATAAGAGTGGTTTTAGAACTCCTAGTGCTTCTCAAATTCAGCAAATAACAACTCACCTTTCTTTCTATGGAAGGATAGAAGGTAAAAATGTGTTCTATTGGTTTCAGAATCATAAGGCTAGGGACAGACAAAAACTAAGGAGGAAACTCAACAAACAACTGCAGCTACAGCAACAACTACAATTCCAGCATTATCAACCAAATCAAGATATCAGTAACAACTTTGTTGCTAACTTTGGTTACCCTTATGCTTCTACTACCAACATTTCCCTTTTTAACTCATCTAGCTTGTTTTTTCAGGGAGGAGATGCAAACATATCAGAAAGAGGAATGAATTGCAAATGGGGTGTGTACAATCCACAATGTTTGGTAGAGAAGAAAGATATGACATTTTGCAACTATGGTTGGACATTAATGGATGCTAATCAACAATCTTCATGTTGCACTAAACCTCTCAAAACTCTTGATCTTTTTCCACTCACAACTACTAGAATCAAAGAAGATTGCACCACCACACCTCATCAACCATCCTCATGTGACATTTGA 612 0.3758 MSPTGSSRWSPTTEQLMILEELYKSGFRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQLQFQHYQPNQDISNNFVANFGYPYASTTNISLFNSSSLFFQGGDANISERGMNCKWGVYNPQCLVEKKDMTFCNYGWTLMDANQQSSCCTKPLKTLDLFPLTTTRIKEDCTTTPHQPSSCDI 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1832 203 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Lal2g1832 203 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 194 - -
Lal2g1832 203 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 194 IPR044555 GO:0003700|GO:0099402
Lal2g1832 203 SMART HOX_1 4 71 IPR001356 GO:0003677
Lal2g1832 203 CDD homeodomain 8 67 IPR001356 GO:0003677
Lal2g1832 203 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Lal2g1832 203 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Lal2g1832 203 Gene3D - 3 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1832 Lal-Chr2 20611838 20613154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1832 1 74 Wox Gene Family AT2G28610 81.081 4.08e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal2g1832 Homeodomain 9.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1832 - - gmx:102663963 257.684