Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1805 ATGGCTAAGTTTTTGAGGCAAATACCAATGTCAATGCCGAGGCAAACCTTGAGCCACAACCACCACCAAATGCCGAGGCAAGTTTTCATCACAAACCACCTTCTTCACTATCTTCTCCTCTTTTCACTTCTTCCTTTTCCTTCCTATGCTACAAACAATGAAGTCACTACTTTGCTTTCATGGGTTCATAGCTTTTCCAAAACCATTCTTCCTTCACCTTTTTCTAACTGGAACCCTTTGGACTCTACTCCATGCAACTGGTCTTACATCAAATGCTCATCACTAAACCATGTCATTGAGATAAATATTCAAGCTGTTGAGTTAGCCCTAACATTTCCTTCAAATATTTCATCACTTCCTTTCCTTCAAAAGCTTGTAATATCTGGTGCTAATCTCACTGGAACTATCTCACTTGATATTGGTAATTGCTTGGATCTTACAGTCATTGACCTAAGCTCAAATAGTCTTGTTGGTAACGTTCCTTCAAGTATAGGCAAACTCAAAAAACTCCAATACTTGAGTTTGAACTCTAACCAGCTCAGTGGTGCAATCCCAATGGAGATTGGTGATTGTGTTAGTCTTATAAACCTTGACATATTTGATAACAACCTTAGTGGTTATATTCCTGTTGAGCTTGGAAATCTTTCAAGTCTTGAGGTTCTAAGAGTTGGAGGGAATAAAGATATTGTTGGGAAGATTCCAGAAGAGCTTGGTGATTGTAGAAATTTGACTATATTAGGTCTTGCTGATACTAAAATTTCTGGTTCAATACCTGCTTCATTAGGTAAGTTAAGTAAACTTCAAACCATGTCTATTTATAGCACTTTACTCTTTGGTGAGATTCCACCTGAAATAGGAAACTGTTCAGAGCTTGTGAACTTGTTTCTGTATGGGAATGATTTATCTGGTTCATTGCCAAAAGAGCTAGGGAGGCTTCAGAAGCTGGAAAAGTTGTTGCTTTGGCAGAATAATATTGTTGGGAACATACCTGAGGAAATAGGAAACTGTAAAAGTTTGAAGGTTCTTGATGTATCCTTAAATTCTTTGTCTGGTAGTATACCTCAAAGTTTGGGGGAACTCTCAAATCTTGAAGAGATTATGCTAAGTAACAATAACATCTCTAGTTCAATACCACCTTGTCTTTCAAATCTCACAAACCTGATGCAGCTGCAGTTAGATTGTAATCAGCTATCAGGTTCAATTCCACCTGAACTTGGAAAGTTGACAAAGTTAACAGTGTTTTTTGCTTGGCAGAATAAACTTCAAGGTCCAATTCCATCAGCATTGGGTGGATGTTTAAGCCTTGAAGCTTTGGATTTGTCATACAATGCACTCACAGATAGCTTACCCCCTGGCCTGTTTAAGCTTCAGAATTTAACAAAGCTTCTATTAATCTCTAACGACATTTCCGGCCCGATCCCTCCTGAGATTGGTAACTGCAGTTCTCTCATTCGACTTCGGCTTGTGAACAACAGAATCAGTGGACAGATACCAAGAGAAATTGGTTCTCTCATTAACCTCATTTTCCTTGATCTGTCTGAAAATCATCTTACTGGATCAGTACCACCTGAGATTGGAAATTGCAAAGAACTGCAAATGCTGAATCTAAGCAATAACTCCCTTTCCGGAACCTTTCCTAGTGGTTTGTCTTCTATCACAAGGCTTGAGGTCTTGGATGTTTCTATTAATCAGCTTTCGGGTGAGGTTCCAACGAGTATCGGCCAACTCACTTCACTTCTTAGACTCATCCTAAGCAAAAATTCTTTCTCAGGATCCATTCCCTCATCACTTGGGCAATGTTCAAGTCTTCAATTGCTAGACCTCAGTAGTAACATGTTCTCAGGGAGCATCCCACCAGAACTGTTTCAAATTGAAGCACTTGACATTGCTCTAAACTTGAGTCACAATGCATTATCTGGATTAATCCCACCAGAGATTTCAGCTTTGAACAAGCTGTCTATTCTAGACCTTTCACACAACAAACTCGAAGGTGACTTGATGGCATTTTCAGCGCTCGAAAATCTTGTTTCTCTTAATGTTTCCTACAACAATTTCAGTGGTTATCTACCAGACAACAACTTGTTCCACCAATTATCTCAAACAGATTTGGAAAGAAATCAAGGATTGTGTCCTAAGGGTCATGATTCCTGTTTCATTAGCAATGCTGCAAAAGCAAAAAAGCGAAACCGTACTAATTCTAAGAGGTCAGAGATGATCAACCTGGCCATTGGATTGCTCAGTGCCTTGACTGTTGCAATGGCAATATTCGGAGTTCTTGCAGTCATTCGAGCAAGGAAAATGGTTCGAGATGACAATGATTCTGAGATGGGAGAGGATTCAGCATGGCCGTGGCAGTTCACTCCATTCCAAAAGGTAAATTTCTCAGTGGAACAAGTTTTGAAATGTTTGGTGGAATCCAATGTAATTGGAAAAGGGTGTTCGGGGATTGTATATCGCGCAGAAATGGAAAATGGGGATGTCATTGCTGTGAAAAAACTATGGCCAACAACATTGACTGCTAGATATGATTGTCAAAATGACAAGCTAGCAGTTAATGAAGGAGTTCGCGATTCGTTTTCAGCTGAGGTAAAAACACTCGGTTCGATTCGACACAAGAACATTGTCAGGTTCTTGGGCTGCTGTTGGAACAAAAACACAAGATTGCTTATGTATGATTACATGTCAAATGGGAGTCTAGGAGGTCTACTTCATGAAAGAACTGGAAACTGCTTAGAATGGGACATTCGATTTCGGATAATACTAGGAGCAGCTCAAGGATTGGCTTATTTACACCATGATTGTGCCCCTCCCATTGTTCACAGAGACATTAAGGCCAACAACATCCTTATTGGCCCTGAATTTGAACCATACATAGCTGATTTTGGTCTTGCCAAACTTGTTGATGATGGAGATTTTGCAAGATCTTCTAGTACACTTGCTGGTTCCTATGGTTACATAGCTCCTGTTTTTGAGGGAGTCGTGGATAGTGTCCACGACTTATGTGATGTCGTGGATAAGGAATGCGATTCCCATGGCGAGATGTTGCGTATTTTACAATTGTACCGGGTGCATAACACTCGACATCATTCAACCAACGAGGGTTATTCCTCGTATCATGAAAATCAGTTCTTAAAACTTATATATAGATCATATGAATATGGTTATATGATGAAGATAACAGAAAAAAGTGATGTATACAGCTATGGTATTGTTGTATTAGAAGTGCTAACAGGAAAACAACCAATTGATCCAACAATACCAGATGGACTTCACATTGTTGATTGGGTAAGACAGAAAAGAGGTAAAGTTGAAGTTCTTGATCAAAGCTTACTCACTAGGCCAGAATCTGAAGTTGAAGAAATGTTACAAACCTTAGGTGTAGCTTTGTTGTGTGTGAACTCAAGAACAGATGATAGACCAACAATGAAAGATGTGGTAGCAATGATGCAAGAAATTAAGCAAGAGAGAGAGGAATATATGAAAGGTGGCAACAACATTATTCTGCATAATGGTTCTTCTGCAAATAATCAACAACAAATTAATCATTCCAATGCTAATCTTCACAACTATGGTTTCTTTGTGTGTATAAGGATGAAGTCTAAATAA 3606 0.3913 MAKFLRQIPMSMPRQTLSHNHHQMPRQVFITNHLLHYLLLFSLLPFPSYATNNEVTTLLSWVHSFSKTILPSPFSNWNPLDSTPCNWSYIKCSSLNHVIEINIQAVELALTFPSNISSLPFLQKLVISGANLTGTISLDIGNCLDLTVIDLSSNSLVGNVPSSIGKLKKLQYLSLNSNQLSGAIPMEIGDCVSLINLDIFDNNLSGYIPVELGNLSSLEVLRVGGNKDIVGKIPEELGDCRNLTILGLADTKISGSIPASLGKLSKLQTMSIYSTLLFGEIPPEIGNCSELVNLFLYGNDLSGSLPKELGRLQKLEKLLLWQNNIVGNIPEEIGNCKSLKVLDVSLNSLSGSIPQSLGELSNLEEIMLSNNNISSSIPPCLSNLTNLMQLQLDCNQLSGSIPPELGKLTKLTVFFAWQNKLQGPIPSALGGCLSLEALDLSYNALTDSLPPGLFKLQNLTKLLLISNDISGPIPPEIGNCSSLIRLRLVNNRISGQIPREIGSLINLIFLDLSENHLTGSVPPEIGNCKELQMLNLSNNSLSGTFPSGLSSITRLEVLDVSINQLSGEVPTSIGQLTSLLRLILSKNSFSGSIPSSLGQCSSLQLLDLSSNMFSGSIPPELFQIEALDIALNLSHNALSGLIPPEISALNKLSILDLSHNKLEGDLMAFSALENLVSLNVSYNNFSGYLPDNNLFHQLSQTDLERNQGLCPKGHDSCFISNAAKAKKRNRTNSKRSEMINLAIGLLSALTVAMAIFGVLAVIRARKMVRDDNDSEMGEDSAWPWQFTPFQKVNFSVEQVLKCLVESNVIGKGCSGIVYRAEMENGDVIAVKKLWPTTLTARYDCQNDKLAVNEGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGGLLHERTGNCLEWDIRFRIILGAAQGLAYLHHDCAPPIVHRDIKANNILIGPEFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPVFEGVVDSVHDLCDVVDKECDSHGEMLRILQLYRVHNTRHHSTNEGYSSYHENQFLKLIYRSYEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRQKRGKVEVLDQSLLTRPESEVEEMLQTLGVALLCVNSRTDDRPTMKDVVAMMQEIKQEREEYMKGGNNIILHNGSSANNQQQINHSNANLHNYGFFVCIRMKSK 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1805 1201 Pfam Protein tyrosine and serine/threonine kinase 1032 1147 IPR001245 GO:0004672|GO:0006468
Lal2g1805 1201 ProSitePatterns Protein kinases ATP-binding region signature. 809 832 IPR017441 GO:0005524
Lal2g1805 1201 ProSiteProfiles Protein kinase domain profile. 803 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1805 1201 ProSiteProfiles Leucine-rich repeat profile. 362 385 IPR001611 GO:0005515
Lal2g1805 1201 Gene3D Ribonuclease Inhibitor 545 629 IPR032675 -
Lal2g1805 1201 Gene3D Ribonuclease Inhibitor 448 544 IPR032675 -
Lal2g1805 1201 Gene3D Ribonuclease Inhibitor 630 717 IPR032675 -
Lal2g1805 1201 SMART serkin_6 803 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1805 1201 PRINTS Leucine-rich repeat signature 531 544 - -
Lal2g1805 1201 PRINTS Leucine-rich repeat signature 649 662 - -
Lal2g1805 1201 SUPERFAMILY L domain-like 449 710 - -
Lal2g1805 1201 Pfam Protein kinase domain 805 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1805 1201 Gene3D Ribonuclease Inhibitor 308 447 IPR032675 -
Lal2g1805 1201 Pfam Leucine rich repeat N-terminal domain 52 93 IPR013210 -
Lal2g1805 1201 Pfam Leucine rich repeat 314 373 IPR001611 GO:0005515
Lal2g1805 1201 SUPERFAMILY Protein kinase-like (PK-like) 1037 1155 IPR011009 -
Lal2g1805 1201 SUPERFAMILY RNI-like 149 507 - -
Lal2g1805 1201 Gene3D Transferase(Phosphotransferase) domain 1 894 1171 - -
Lal2g1805 1201 SUPERFAMILY Protein kinase-like (PK-like) 782 988 IPR011009 -
Lal2g1805 1201 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 27 990 - -
Lal2g1805 1201 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1048 1170 - -
Lal2g1805 1201 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
Lal2g1805 1201 SMART LRR_sd22_2 360 386 - -
Lal2g1805 1201 SMART LRR_sd22_2 167 199 - -
Lal2g1805 1201 SMART LRR_sd22_2 649 677 - -
Lal2g1805 1201 SMART LRR_typ_2 672 697 IPR003591 -
Lal2g1805 1201 SMART LRR_typ_2 215 240 IPR003591 -
Lal2g1805 1201 SMART LRR_typ_2 384 408 IPR003591 -
Lal2g1805 1201 SMART LRR_typ_2 504 528 IPR003591 -
Lal2g1805 1201 SMART LRR_typ_2 432 456 IPR003591 -
Lal2g1805 1201 SMART LRR_typ_2 649 671 IPR003591 -
Lal2g1805 1201 SMART LRR_typ_2 360 383 IPR003591 -
Lal2g1805 1201 SMART LRR_typ_2 312 336 IPR003591 -
Lal2g1805 1201 SMART LRR_typ_2 576 600 IPR003591 -
Lal2g1805 1201 SMART LRR_typ_2 167 191 IPR003591 -
Lal2g1805 1201 SMART LRR_typ_2 601 624 IPR003591 -
Lal2g1805 1201 Gene3D Ribonuclease Inhibitor 50 203 IPR032675 -
Lal2g1805 1201 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 1048 1170 - -
Lal2g1805 1201 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 27 990 - -
Lal2g1805 1201 Gene3D Phosphorylase Kinase; domain 1 787 893 - -
Lal2g1805 1201 Gene3D Ribonuclease Inhibitor 204 307 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1805 Lal-Chr2 20288150 20292779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1805 46 1163 Receptor kinase-like Gene Family AT5G56040 43.975 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal2g1805 Pkinase 2.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1805 - - gmx:100794698 1683.31